Query= MSMg01no279_p10.b1 MSMg01no279_p10.b1 CHROMAT_FILE:
MSMg01no279_p10.b1 PHD_FILE: MSMg01no279_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:42 2005
(327 letters)
>mm_chr6_3752494_3753220
Length = 727
Score = 611 bits (316), Expect = e-179
Identities = 319/320 (99%)
Strand = Plus / Plus
Query: 5 gaattctcaccactatttattttaattcattctctaaaatttagggtatatatttccatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaccactatttattttaattcattctctaaaatttagggtatatatttccatg 264
Query: 65 caaatttctatgttttattccatatgttgctgttgcattttgtaaacaaatcacctcata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaatttctatgttttattccatatgttgctgttgcattttgtaaacaaatcacctcata 324
Query: 125 cttactgtttttaccaaattgttttattagcatacactaattatacaaagtaaaggattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttactgtttttaccaaattgttttattagcatacactaattatacaaagtaaaggattt 384
Query: 185 cttataccatttctgcataaaggttttaagcatagaattctcacacataatttaggaact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttataccatttctgcataaaggttttaagcatagaattctcacacataatttaggaact 444
Query: 245 atttctataagaatattatctgaaaatatttataatattctttattactttatatggagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttctataagaatattatctgaaaatatttataatattctttattactttatatggagt 504
Query: 305 tgtttactgaagtctatttt 324
| ||||||||||||||||||
Sbjct: 505 tatttactgaagtctatttt 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_p10.g1 MSMg01no279_p10.g1 CHROMAT_FILE:
MSMg01no279_p10.g1 PHD_FILE: MSMg01no279_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:42 2005
(295 letters)
>mm_chr6_3819989_3820683
Length = 695
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%)
Strand = Plus / Minus
Query: 1 attgatccagggttgagaggatggccattgatgtttaaatgatgacaagttattggaaaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 493 attgatccagggttgagaggatggccatttatgtttaaatgatgacaagttataggaaaa 434
Query: 61 tgtgaacaaattctaaacacacttaagagatagaattctaatatagtatgtaattggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tgtgaacaaattctaaacacacttaagagatagaattctaatatagtatgtaattggata 374
Query: 121 tagaagaaactggaaagcaaatatgtggtccggatattttaaaagtagatgggaaaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tagaagaaactggaaagcaaatatgtggtccggatattttaaaagtagatgggaaaaggg 314
Query: 181 aagttttgaaattgtacatatcactgtggcagtgaaacatgggaagggagatgtgggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aagttttgaaattgtacatatcactgtggcagtgaaacatgggaagggagatgtgggaga 254
Query: 241 ctgtgaacacatcaggcacttggctttcttaaggagaaataattcctccagta 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ctgtgaacacatcaggcacttggctttcttaaggagaaataattcctccagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
