Query= MSMg01no288_a16.b1 MSMg01no288_a16.b1 CHROMAT_FILE:
MSMg01no288_a16.b1 PHD_FILE: MSMg01no288_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:02 2005
(168 letters)
>mm_chr6_74659616_74660182
Length = 567
Score = 317 bits (164), Expect = 2e-91
Identities = 167/168 (99%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 1 ttcttggctagatctatgaccaagtgccatgtctctgtctcacactgatagggaatataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttcttggctagatctatgaccaagtgccatgtctctgtctcacactgatagggaatataa 308
Query: 61 atccaccatcaaagtgctgaaagaactactttacagcctccatccttgcttgaggatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atccaccatcaaagtgctgaaagaactactttacagcctccatccttgcttgaggatgta 248
Query: 121 tggtttccctcttcacacaatctgcacaagatacttctcttgtatctt 168
|||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 247 tggtttccctcttcacacaatctgcacaag-tacttctcttgtatctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 567
Length adjustment: 8
Effective length of query: 160
Effective length of database: 559
Effective search space: 89440
Effective search space used: 89440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no288_a16.g1 MSMg01no288_a16.g1 CHROMAT_FILE:
MSMg01no288_a16.g1 PHD_FILE: MSMg01no288_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:02 2005
(231 letters)
>mm_chr6_74500923_74501553
Length = 631
Score = 431 bits (223), Expect = e-125
Identities = 229/231 (99%)
Strand = Plus / Plus
Query: 1 agtgcaaataatttagaatgaaacaagtagaggaattatgtgtaaaatttcttctctctt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 agtgcaaataatttagaatgaaacaagtagaagaattatgtgtaaaatttcttctctctt 260
Query: 61 aaaatgttctatagctttgaacaagtatgtttggaaactgacataccaaacagacaccaa 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 aaaatgttctatagctttgaacaagtatgttgggaaactgacataccaaacagacaccaa 320
Query: 121 ataaagatagatggcaggttctgatgataaagataggtagatggatagatagatagatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaagatagatggcaggttctgatgataaagataggtagatggatagatagatagatag 380
Query: 181 atagatagatagatagatagatagataagtagataaatagatggtagatat 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagatagatagatagatagatagataagtagataaatagatggtagatat 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
