Query= MSMg01no289_d15.b1 MSMg01no289_d15.b1 CHROMAT_FILE:
MSMg01no289_d15.b1 PHD_FILE: MSMg01no289_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:29 2005
(289 letters)
>mm_chr6_50325593_50326279
Length = 687
Score = 540 bits (279), Expect = e-158
Identities = 286/289 (98%), Gaps = 2/289 (0%)
Strand = Plus / Plus
Query: 1 agaagagatttttcagcacttccctttacaggaggatcagccgcaggggctgctgggaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaagagatttttcagcacttccctttacaggaggatcagccgcaggggctgctgggaat 260
Query: 61 tgcagaagttctgttcctcaagccaggtggtagttccatatttgccaaaatacagttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcagaagttctgttcctcaagccaggtggtagttccatatttgccaaaatacagttcta 320
Query: 121 tatgtactctaagcttggtgcactttactggaaaaagccacagtaaaagaagaatggata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtactctaagcttggtgcactttactggaaaaagccacagtaaaagaagaatggata 380
Query: 181 taaatgaccattctgtgtatgacagggaagctgttacattttgttcagatcagcatgttc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 taaatgaccattctgtgtatgacagggaagctattacattttgttcagatcagcatgttc 440
Query: 241 cttgagttagataaagttttttttttttcatccaagggtcactaagtga 289
|||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 cttgagttagataaagtttttttttt--catccaagggtcactaagtga 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 687
Length adjustment: 9
Effective length of query: 280
Effective length of database: 678
Effective search space: 189840
Effective search space used: 189840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no289_d15.g1 MSMg01no289_d15.g1 CHROMAT_FILE:
MSMg01no289_d15.g1 PHD_FILE: MSMg01no289_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:30 2005
(274 letters)
>mm_chr6_50516774_50517446
Length = 673
Score = 460 bits (238), Expect = e-134
Identities = 259/266 (97%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 9 gagttcgttttgaagtacaccaagaaagtatgctaacgagatttccatttccaatatggt 68
|||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||
Sbjct: 473 gagttcgttttgaagtacaccaggaaagtatgctaaggagacttccatttccaatatggt 414
Query: 69 tagaagggatgccaagtctagcggattcccgggaatcctctactcaggcgaatcctgctt 128
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cagaagggatgccaagtctagcggattcccgggaatcctctactcaggcgaatcctgctt 354
Query: 129 ctcccttaaagcttgcctgcacaccctccttgtttttctacaaacactaggggaagaaaa 188
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 353 ctcccttaaagcttgcctgcacaccctcctcgtttt-ctacaaacactaggggaagaaaa 295
Query: 189 cagggactctgggtaagatgtgatcctgtctgccacttgtgcgcaccttccccagctttg 248
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 294 cagggactctgggtaagatgtgatcctgtctgccacttgtgcgtaccttccccagctttg 235
Query: 249 aggctctcactgggagagcaggaaga 274
||||||||||||||||||||||||||
Sbjct: 234 aggctctcactgggagagcaggaaga 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 673
Length adjustment: 9
Effective length of query: 265
Effective length of database: 664
Effective search space: 175960
Effective search space used: 175960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
