TATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCAGAATATTACCTATAAAAAATACAGTGGAGAGTAAGTTAT
GTTAAAATGTGATTTTGATTAAAACAGGTTTTTCACACTTGCTAAATAAA
TATTTTTTTCTCTTTTGTTCCTTTCTACTTTATTTTTATAATGAAAATAT
TCTGATGATGTCCTTTGCATCTTATAAAGAAGAAAGACAAGGCCAAGCCT
GCGATATGAATACATATTTCTACAAAAAATAGGTATTAATTTATTTAAAT
ATATTATAAGTGGATTATAATATGACTTATTTAAAAAATCCTATAATCTC
CAAAAGAGTAATTATGTAATTTTCTCCCAGGCAACTATTGACTATCTTAC
GTTAGAGTTCATCAAATGACACACACTGGCAAAAGGTATCTATTGTTAAA
AGAAAGATCATCTGTAAAACTGGTTGTAGAAAATATATGAAGAAACCTTT
TAATATTTTTGGTAAGAATTTTAAGTTGGAAAACCCCTACTTTATCTAGA
CACACTACTTAGTACAAGAGCAGCCATAATGTAGTTGATAACTAAATGAA
CTCTTTTAGAAATGAACCAGATGGATTGTGATTAAAGGCTTAAAAGAATG
TTAAAGGAATCTTATGCACATGTGTGGGATGTGAACATGTGCAAGTGAAG
CACATGGTGCAATGGGAGGTATCACTGAAATCCATGAAT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCCAAGGAATACCGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAAAATCCTTAATCATCAGAGAAATGCA
AATCAAAACAACCCTTAGATTCCATCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCATGTGACAACAGATGCTGGGGAGGATGTGGAGAAAGAGGA
ACACTTCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGTTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATC
CCGCAGTACCTCTCCTGGGCATATATCCAGAAGATGTCCCAATGGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAAAAAA
TGTGGTACATTTACACAATAGAGTACTACTCAGCTATTAAAAATATGAAT
TTTTGAATTTCCTAGGCAATTGGTTGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACACAATCACAAAGGAACTCAAATGATATGTACTCACTGATAAG
TGGATATTAGCCCAGAAGGTTAGTATAGGGAGATATAAGGTACAATTTGC
AAAATATATGAAACTGAAGAAGAACGAAGACCAAAGTGG

Query= MSMg01no289_e03.b1 MSMg01no289_e03.b1 CHROMAT_FILE:
MSMg01no289_e03.b1 PHD_FILE: MSMg01no289_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:32 2005
         (690 letters)



>mm_chr6_19855966_19857056
          Length = 1091

 Score = 1191 bits (616), Expect = 0.0
 Identities = 670/688 (97%), Gaps = 2/688 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccagaatattacctataaaaaatacagtggagagtaagttatgttaaaatgtgat 64
           ||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 204 gaattccagaataatacctataaaaaatacagtggagagtaaggtgtgttaaaatgtgat 263

                                                                       
Query: 65  tttgattaaaacaggtttttcacacttgctaaataaatatttttttctcttttgttcctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttgattaaaacaggtttttcacacttgctaaataaatatttttttctcttttgttcctt 323

                                                                       
Query: 125 tctactttatttttataatgaaaatattctgatgatgtcctttgcatcttataaagaaga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctactttatttttataatgaaaatattctgatgatgtcctttgcatcttataaagaaga 383

                                                                       
Query: 185 aagacaaggccaagcctgcgatatgaatacatatttctacaaaaaa-taggtattaattt 243
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 aagacaaggccaagcctgcgatatgaatacatatttctacaaaaaaataggtattaattt 443

                                                                       
Query: 244 atttaaatatattataagtggattataatatgacttattt-aaaaaatcctataatctcc 302
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 atttaaatatattataagtggattataatatgacttattttaaaaaatcctataatctcc 503

                                                                       
Query: 303 aaaagagtaattatgtaattttctcccaggcaactattgactatcttacgttagagttca 362
           |||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||
Sbjct: 504 aaaagagtaattatgtaattttctcccaggtaactattgaccatcctaagttagagttca 563

                                                                       
Query: 363 tcaaatgacacacactggcaaaaggtatctattgttaaaagaaagatcatctgtaaaact 422
           | |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaatgagagacactggcaaaaggtatctattgttaaaagaaagatcatctgtaaaact 623

                                                                       
Query: 423 ggttgtagaaaatatatgaagaaaccttttaatatttttggtaagaattttaagttggaa 482
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 624 ggttgtagaaaatatatgaagaaaccttttaatatttttggtaagaatattaagttggaa 683

                                                                       
Query: 483 aacccctactttatctagacacactacttagtacaagagcagccataatgtagttgataa 542
           |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 684 aaccactactttatctagacagactacttagtacaagagcagcaataatgtagttgataa 743

                                                                       
Query: 543 ctaaatgaactcttttagaaatgaaccagatggattgtgattaaaggcttaaaagaatgt 602
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctaaatgaattcttttagaaatgaaccagatggattgtgattaaaggcttaaaagaatgt 803

                                                                       
Query: 603 taaaggaatcttatgcacatgtgtgggatgtgaacatgtgcaagtgaagcacatggtgca 662
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taaaggaatcttatgtacatgtgtgggatgtgaacatgtgcaagtgaagcacatggtgca 863

                                       
Query: 663 atgggaggtatcactgaaatccatgaat 690
           ||||||||||||||||||||||||||||
Sbjct: 864 atgggaggtatcactgaaatccatgaat 891


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1091
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1081
Effective search space:   735080
Effective search space used:   735080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)