Query= MSMg01no292_f17.b1 MSMg01no292_f17.b1 CHROMAT_FILE:
MSMg01no292_f17.b1 PHD_FILE: MSMg01no292_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:24 2005
(161 letters)
>mm_chr6_12386572_12387131
Length = 560
Score = 288 bits (149), Expect = 1e-82
Identities = 158/161 (98%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 1 attgcctttgctctgaacctatggttatgaaaagtctgaagcaagccatcacatatatgc 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 attgtctttgctctgaacctatggttatgaaaagtctgaagcaagccatcacatatatgc 301
Query: 61 caggtgctaaaaataaaacaaaagattagattaaaggaggagatatcatctgacttagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 caggtgctaaaaataaaacaaaagattagattaaaggaggagatatcatctgacttagcc 241
Query: 121 atgttttgttggtcaggtttctgtttgggcttttaactttt 161
||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 240 atggtttgttggtcaggtttctgtttgg-cttttaactttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 560
Length adjustment: 8
Effective length of query: 153
Effective length of database: 552
Effective search space: 84456
Effective search space used: 84456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no292_f17.g1 MSMg01no292_f17.g1 CHROMAT_FILE:
MSMg01no292_f17.g1 PHD_FILE: MSMg01no292_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:24 2005
(280 letters)
>mm_chr6_12219831_12220510
Length = 680
Score = 466 bits (241), Expect = e-136
Identities = 268/277 (96%)
Strand = Plus / Plus
Query: 4 ttgaaaatcaatttgctgctttcagtttcaaagttaggtattatttggaaagtgtggcaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 204 ttgaaaatcaatttgctgctttcagtttcaaagttaggtattatttggaaagtgtagcaa 263
Query: 64 aagacacgcggacatttgatatgcccattccttgtatttaactaatgttgatattttctc 123
|||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagacatgtggacatttgatgtgcccattccttgtatttaactaatgttgatattttctc 323
Query: 124 attttgctcaagacctttacataactgaatcattttgctagccaagttgtagattttttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attttgctcaagacctttacataactgaatcattttgctagccaagttgtagattttttt 383
Query: 184 ttcttagcatgcccatgaacacaattggcaaaaactgaatttacagctaagattttcaag 243
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 384 ttcttagcatgcccatgaacaccgttgacaaaaactgaatttacagctaagattttcaag 443
Query: 244 atcgaggtcttatccattgttgcccacgattggacaa 280
|||| ||||||||||||| ||||||||||||||||||
Sbjct: 444 atcgtggtcttatccatttttgcccacgattggacaa 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
