Query= MSMg01no292_f20.b1 MSMg01no292_f20.b1 CHROMAT_FILE:
MSMg01no292_f20.b1 PHD_FILE: MSMg01no292_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:24 2005
(366 letters)
>mm_chr6_126925776_126926540
Length = 765
Score = 636 bits (329), Expect = 0.0
Identities = 353/361 (97%), Gaps = 1/361 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttactgccactctcaccttccctctgtgaccttgcccaggtctattaataac 63
|||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 204 ggaattctttaccgcca-tctcaccttccctctgtgaccttgcccaggtctactaataac 262
Query: 64 atttcacgggctggcgaaatcgtgttcttttctgccgacctgatgtaagttagtgtagac 123
|||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 263 atttcacgggctggggaaattgtgttcttttctgccgacctgatgtgagttagtgtagac 322
Query: 124 ccacgcctggcagcattctggcgctctgcaatgctgacaaccggatcgctgtcacttctc 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccacacctggcagcattctggcgctctgcaatgctgacaaccggatcgctgtcacttctc 382
Query: 184 catcccctgggctccctgtctcactgctcttccacacccgtctccaggcagaaacagtat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catcccctgggctccctgtctcactgctcttccacacccgtctccaggcagaaacagtat 442
Query: 244 tcggatctctgtctctgatcgctgatgtttatcctcctttgtccaaattggctttgggat 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcggatctctgtctctgatcgttgatgtttatcctcctttgtccaaattggctttgggat 502
Query: 304 cctctttcctcataggctcttagtctgccagcatgtcagaactgtggcagacacgctctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctctttcctcataggctcttagtctgccagcatgtcagaactgtggcagacacgctctg 562
Query: 364 g 364
|
Sbjct: 563 g 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 765
Length adjustment: 9
Effective length of query: 357
Effective length of database: 756
Effective search space: 269892
Effective search space used: 269892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_f20.g1 MSMg01no292_f20.g1 CHROMAT_FILE:
MSMg01no292_f20.g1 PHD_FILE: MSMg01no292_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:25 2005
(191 letters)
>mm_chr6_127105124_127105714
Length = 591
Score = 273 bits (141), Expect = 6e-78
Identities = 179/193 (92%), Gaps = 7/193 (3%)
Strand = Plus / Minus
Query: 1 ccgggcggccctcgccaccagcaatcgcgatactgggacggatctccgggaccagaagaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 322 ccgggcggccctcgccaccagcaatcgcgatactgggacggatctctgggaccagaagaa 263
Query: 61 ctggaccgcaaactaaagaaaccagccttttttggagcaaacgtcgggtctccatatcaa 120
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct: 262 ctggaccgcaaactaaagaaaccagccttttctggagcaaacggcgggtctccatgtcaa 203
Query: 121 agtaaa--taaata-a-ataaatataaataagtgtgtagggagggggaa-ccactggggg 175
|||||| || ||| | |||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 202 agtaaaaatatatatatataaatataaataagtgtgtagggagggggaaaccattggggg 143
Query: 176 ggggtgaaagatg 188
|| |||| ||||
Sbjct: 142 gg--tgaaggatg 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space: 106689
Effective search space used: 106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|