Query= MSMg01no292_i15.b1 MSMg01no292_i15.b1 CHROMAT_FILE:
MSMg01no292_i15.b1 PHD_FILE: MSMg01no292_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:38 2005
(572 letters)
>mm_chr6_143951397_143952368
Length = 972
Score = 1029 bits (532), Expect = 0.0
Identities = 559/568 (98%)
Strand = Plus / Plus
Query: 5 gaattcatcaaatattctggcattttatttagacatagcccaaagtgatgataactctct 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcaaatattttggcattttatttagacatagcccaaagtgatgataactctct 264
Query: 65 atccagatggtcaccagtctaatatatggtgataaggatactggggactgtgtaaaactg 124
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atccagatggtcaggagtctaatatatggtgataaggatactggggactgtgtaaaactg 324
Query: 125 gtacattattatttgttagtgataaagcaatctgtactgatttcatcagccaaattgaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtacattattatttgttagtgataaagcaatctgtactgatttcatcagccaaattgaca 384
Query: 185 tgacccttgggctctgtgagaatagcaaggctcacttggggcaagacagaagtcactccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgacccttgggctctgtgagaatagcaaggctcacttggggcaagacagaagtcactccc 444
Query: 245 accttcccatgctaagacttttacctagaatgtactgaagaagaggctggaattacagta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accttcccatgctaagacttttacctagaatgtactgaagaagaggctggaattacagta 504
Query: 305 agcaacgtccatttatactacggccccccacaacagccatgctacctctctgaattccag 364
||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 agcaacgtccaaagagactacggcccccaacaacagccatgctacctctctgaattccag 564
Query: 365 ctccctccaagacagaggcatgggaaaaagctaaaggaaacaggtctgtaagtccatctc 424
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctccctcgaagacagaggcatgggaaaaagctaaaggaaacaggtctgtaagtccatctc 624
Query: 425 tgctcattcttctggtgtcagaactctctccagggagcaggatacattgctatcaaagca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgctcattcttctggtgtcagaactctctccagggagcaggatacattgctatcaaagca 684
Query: 485 actgtagttcaatgtacagaagattctaatagctgcttcagactgagtgcaggacccagg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 actgtagttcaatgtacagaagattctaatagctgcttcagactgagtgcaggacccagg 744
Query: 545 gtgatgtcttgcttcctgtcccttagca 572
||||||||||||||||||||||||||||
Sbjct: 745 gtgatgtcttgcttcctgtcccttagca 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_i15.g1 MSMg01no292_i15.g1 CHROMAT_FILE:
MSMg01no292_i15.g1 PHD_FILE: MSMg01no292_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:38 2005
(287 letters)
>mm_chr6_144034981_144035666
Length = 686
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 caaagcctggttgttaggcttgtatggaaaacaattttacatattctgctatctctaata 60
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 483 caaagcctggctgttaggcttgtatggaaaacacttttacatattctgctatctctaata 424
Query: 61 tatatatatttttcagtttttatattcacagaattttattcagaaaccagtatagttttg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tatatatatatttcagtttttatattcacagaattttattcagaaaccagtatagttttg 364
Query: 121 tactttggtcttttaaatcttcacatgtaaaaagtatgttctttaatgttctgctcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tactttggtcttttaaatcttcacatgtaaaaagtatgttctttaatgttctgctcaata 304
Query: 181 aataattttgttcacattaataatgctaagactattctctttattgaatacctttaaaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 303 aataattttgttcacattaataatgctaagactattctctttattgaatacctt-aaaat 245
Query: 241 gtctaaaatactattaaaagggtttgaactttccccaggaataa 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gtctaaaatactattaaaagggtttgaactttccccaggaataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
