Query= MSMg01no293_f15.b1 MSMg01no293_f15.b1 CHROMAT_FILE:
MSMg01no293_f15.b1 PHD_FILE: MSMg01no293_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:44 2005
(713 letters)
>mm_chr6_97961306_97962418
Length = 1113
Score = 1301 bits (673), Expect = 0.0
Identities = 700/709 (98%)
Strand = Plus / Plus
Query: 5 gaattcccaatccctcttctttatcagcctttcccccttttttttagcatattcttttaa 64
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattcccaatccctcttctttatcagcctttcccccctttttttagcatattcttttaa 264
Query: 65 aactgtagtgtgtaactctcttcagtaacagattatgaaattaaggcgcgctctagtgta 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aactgtagtgtgtaaatctcttcagtaacagattatgaaattaaggcgcgctctagtgta 324
Query: 125 agcttggatttacatgtctcctccattgtaatggaaggcttacgtgtttacagagggggc 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 agcttggatttacatgtctcctccattgtaatggaaggcttatgtgtttacagagggggc 384
Query: 185 tggtagggagatcgcttggcaggcattgtcttaagataaaactgcactgtgggttttcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggtagggagatcgcttggcaggcattgtcttaagataaaactgcactgtgggttttcca 444
Query: 245 agccgggtatttggaatgtgccttggaactgaaatagagacacgctttacctgattagtg 304
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 agccgggtatttggactgtgccttggaactgaaatagagacacactttacctgattagtg 504
Query: 305 tcccagctccttccctataacgagtatacttcagcatatactgacttgcccatgcagaaa 364
||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 505 tcccagctccttccctagaacgagtgtacttcagcatttactgacttgcccatgcagaaa 564
Query: 365 gattcctctaaattacccaaaacacaacatttgaatctaatttagccaaggaacataatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gattcctctaaattacccaaaacacaacatttgaatctaatttagccaaggaacataatt 624
Query: 425 aattgagtctcaagtagacatatccccagatgcctgagagaagtatgtcttgaaaaattg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 625 aattgagtctcaagtagacatatccccagatgcctgagagaagtatgtcttgaaaaactg 684
Query: 485 agtggccaacagctcggcttgagaagcctggctctggcttctccctttggtggcctgtac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtggccaacagctcggcttgagaagcctggctctggcttctccctttggtggcctgtac 744
Query: 545 aaggcatggtcccttacagtggtgtttctggctggctgctacagcttttgttgctttcaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaggcatggtcccttacagtggtgtttctggctggctgctacagcttttgttgctttcaa 804
Query: 605 tttttagtcttgagaattggtcccagtgctcactctgagtatcttgggacacctccctgg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tttttagtcttgagaattggtcccagtgctcactctgagtatcttgggacacctccctgg 864
Query: 665 gctgccgtttttggtgctcagatatgggggatccacctcagggtcttct 713
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gctgccgtttttggtgctcagatatgggggatccacctcagggtcttct 913
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 713
Length of database: 1113
Length adjustment: 10
Effective length of query: 703
Effective length of database: 1103
Effective search space: 775409
Effective search space used: 775409
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no293_f15.g1 MSMg01no293_f15.g1 CHROMAT_FILE:
MSMg01no293_f15.g1 PHD_FILE: MSMg01no293_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:44 2005
(292 letters)
>mm_chr6_98118578_98119270
Length = 693
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 tctgcttggccttcaaccccatgtcagtcccaaagcatagccaaggattgca-ttctttt 59
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 492 tctgcttggccttcaaccccatgtcagtcccaaagcatagccaaggattgcatttttttt 433
Query: 60 cttagataattagatacttaaacaaaagggcaacctttcaaataagtttctgaggaccaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cttagataattagatacttaaacaaaagggcaacctttcaaataagtttctgaggaccaa 373
Query: 120 aatatcctaaaaaaggcagaacacagaaaaatcacttaatcatataaaaatcccatttca 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 372 aatatcctaaaaaaggcagaacacagaaaagtcacttaatcatataaaaatcccatttca 313
Query: 180 atcattaaagtgctatcctgtatccattacaaaattacctttaaaattatgaaatgttta 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 312 atcattaaagtgctatcctgtatccattacaaaattacctttaaaactatgaaatgttta 253
Query: 240 aattagatagctggttttctgctccaagattttcagagataatattgagaat 291
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 252 aattagatagctggttttctgctccaagatttgcagagataatattgagaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
