Query= MSMg01no293_l16.b1 MSMg01no293_l16.b1 CHROMAT_FILE:
MSMg01no293_l16.b1 PHD_FILE: MSMg01no293_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:14 2005
(575 letters)
>mm_chr6_14918067_14919041
Length = 975
Score = 1081 bits (559), Expect = 0.0
Identities = 568/571 (99%)
Strand = Plus / Plus
Query: 5 gaattccacactaattccatctagcccggagctttttctggttgggaggttttaaatgac 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacactaaatccatctagcccggagctttttctggttgggaggttttaaatgac 264
Query: 65 ttctatttctctgtgagatatagacatttttagatagtttacctgctcttgatttaactt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttctatttctctgtgagatatagacatttttagatagtttacctgctcttgatttaactt 324
Query: 125 tggtatgtggtatctgtctaaaccatccatttcatctagattttccagttttgttgagta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggtatgtggtatctgtctaaaccatccatttcatctagattttccagttttgttgagta 384
Query: 185 taggcttttataatagcatttgatgatttttcaagtttccttcttttctgttgttatgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taggcttttataatagcatttgatgatttttcaagtttccttcttttctgttgttatgtc 444
Query: 245 ttccttttcatttctgattttgttaatttagatactgccctgggccttcctcagtcatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttccttttcatttctgattttgttaatttagatactgccctgggccttcctcagtcatga 504
Query: 305 ggagtggacagtgcttgctcagttagagaagatctctccacttcaattgacctcgtagca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggagtggacagtgcttgctcagttagagaagatctctccacttcaattgacctcgtagca 564
Query: 365 gtctcacacacgcaaacctagaagctaactaatgggcatgtgcacgcctttgtggagcaa 424
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtctcacaaaggcaaacctagaagctaactaatgggcatgtgcacgcctttgtggagcaa 624
Query: 425 tagtgtctctccaggcaattactaatgcttgtcaggttggcaatcaaagctaaccatcac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tagtgtctctccaggcaattactaatgcttgtcaggttggcaatcaaagctaaccatcac 684
Query: 485 aaatgtcaacgtcaaggtattttggtttgttccaacagtttatttttggagtaggttgtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaatgtcaacgtcaaggtattttggtttgttccaacagtttatttttggagtaggttgtg 744
Query: 545 aatcctgttcagatggttaagttttgctgct 575
|||||||||||||||||||||||||||||||
Sbjct: 745 aatcctgttcagatggttaagttttgctgct 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_l16.g1 MSMg01no293_l16.g1 CHROMAT_FILE:
MSMg01no293_l16.g1 PHD_FILE: MSMg01no293_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:14 2005
(344 letters)
>mm_chr6_15086853_15087592
Length = 740
Score = 600 bits (310), Expect = e-176
Identities = 338/356 (94%), Gaps = 16/356 (4%)
Strand = Plus / Minus
Query: 1 ttggaaatggataaatatcaataatgcttttaccatttaagtagatttctgagtctcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttggaaatggataaatatcaataatgcttttaccatttaagtagatttctgagtctcaaa 412
Query: 61 tatatcctagagagcaatacattatagtattaatattgggatgctctttcaaacataggt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 411 tatatcctagagagcaatacattatagtattaacattgggatgctctttcaaacataggt 352
Query: 121 gcagttctgtattaagaaatcaaactgtacataacttttaaactatcatgttaaaatcca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gcagttctgtattaagaaatcaaactgtacataacttttaaactatcatgttaaaatcc- 293
Query: 181 gagagtgacactctgacctcataggctttccagactccaaaatagctgaaaaaaaaacta 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 292 -agagtgacactctgacctcataggctttccagactccaaaatagctg--aaaaaaacta 236
Query: 241 tcgataatattttcttagaaaattaactagaaaac------------agagagagagaga 288
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 235 tcgataatattttcttagaaaattaactagaaaacagagagagagagagagagagagaga 176
Query: 289 gagagtgagagagagagagagagagagagaaataacccagataacatatctctata 344
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gagagagagagagagagagagagagagagaaataacccagataacatatctctata 120
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 740
Length adjustment: 9
Effective length of query: 335
Effective length of database: 731
Effective search space: 244885
Effective search space used: 244885
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
