Query= MSMg01no294_g24.b1 MSMg01no294_g24.b1 CHROMAT_FILE:
MSMg01no294_g24.b1 PHD_FILE: MSMg01no294_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:07 2005
(320 letters)
>mm_chr6_82154980_82155699
Length = 720
Score = 555 bits (287), Expect = e-162
Identities = 308/315 (97%), Gaps = 2/315 (0%)
Strand = Plus / Minus
Query: 5 gaattctgcccagccctgcttcctcagaaccccatttgtctacccctgtccttttctgtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 518 gaattctgcccagccctgcttcctcagaaccccatttgtctacccctgtccttttctttg 459
Query: 65 attgcttactttttacctgctgaacaaactatccctagctcacacatttacgttcaatgg 124
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 458 attgcttactttttacatgctgaacaaactatccctagctcacacatttacattcaatgg 399
Query: 125 agtcaggttcacagacataggtcactgacaaacttctatggggctcaagtcaaagaaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agtcaggttcacagacataggtcactgacaaacttctatggggctcaagtcaaagaaatt 339
Query: 185 ctctgcattccaatttcactctaaagggcacctgcctcctttgcctcctcaaaagctttc 244
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctctgcattccaacgtcactctaaagggcacctgcctcctttgcctcctcaaaagctttc 279
Query: 245 ctggaaccataatttctatagcaatcacacattctg-cttttcctgatgcagccacagca 303
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 278 ctggaaccataatttctatagcaatcacacattctgtc-tttcctgatgcagccacagca 220
Query: 304 aaactacagactgcg 318
|||||||||||||||
Sbjct: 219 aaactacagactgcg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_g24.g1 MSMg01no294_g24.g1 CHROMAT_FILE:
MSMg01no294_g24.g1 PHD_FILE: MSMg01no294_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:07 2005
(201 letters)
>mm_chr6_81976934_81977534
Length = 601
Score = 335 bits (173), Expect = 1e-96
Identities = 194/201 (96%)
Strand = Plus / Plus
Query: 1 atctcacctatgagaaggatatgaatttgaatggcatgcagtacacagtgctgtgattag 60
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 201 atctcacctatgagaaggatatgcatttgaatggcatgcagtacacactgctgtgattag 260
Query: 61 aacatggctccccaatttgggttagaaacaatattcagattcttaaactagaaagatcaa 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 aacatggctccccaatttgggttagaaacaatattcaaattcttaaactagaaagatcaa 320
Query: 121 agtgagcgaactttggaaagagataaggtcctgagagttcttccctgccgaacaaattaa 180
|||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 agtgagtgaactttggaaagagataaggtcctgagagttcttccctggtgaacaaattaa 380
Query: 181 cttactcatggtttaatagat 201
||||||||||| |||||||||
Sbjct: 381 cttactcatggattaatagat 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 601
Length adjustment: 8
Effective length of query: 193
Effective length of database: 593
Effective search space: 114449
Effective search space used: 114449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
