Query= MSMg01no294_m21.b1 MSMg01no294_m21.b1 CHROMAT_FILE:
MSMg01no294_m21.b1 PHD_FILE: MSMg01no294_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:34 2005
(320 letters)
>mm_chr6_39242294_39243013
Length = 720
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%)
Strand = Plus / Plus
Query: 5 gaattccatgccttcttttgggactctccccaggaggcctcttttttccaggctctgaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaattccatgccttcttttgggactctccccaggaggcctcttttttccaggctccgaga 264
Query: 65 tagcaaaactattgcctgtctcaccactgcagtccagagtgcagtgctattctcctgtgc 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagcaaaaccattgcctgtctcaccactgcagtccagagtgcagtgctattctcctgtgc 324
Query: 125 tggataccctatattctagtgcggggattccaagtctcttcctttcctattttgatttcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggataccctatattctagtgcggggattccaagtctcttcctttcctattttgatttcc 384
Query: 185 aatcctacttgatttgctccctcctttgggtgacctaataaaagttccttgggagtgggc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 aatcctacttgatttgctccctcctttgggtgacctaataaaagttccttgggagtggac 444
Query: 245 ttggaacactttgttccgtagtgaaaattgatgaattgtctacagcaagctcactgtgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggaacactttgttccgtagtgaaaattgatgaattgtctacagcaagctcactgtgtt 504
Query: 305 gctgagtctgactc 318
||||||||||||||
Sbjct: 505 gctgagtctgactc 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_m21.g1 MSMg01no294_m21.g1 CHROMAT_FILE:
MSMg01no294_m21.g1 PHD_FILE: MSMg01no294_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:34 2005
(288 letters)
>mm_chr6_39395481_39396172
Length = 692
Score = 480 bits (248), Expect = e-140
Identities = 273/284 (96%), Gaps = 8/284 (2%)
Strand = Plus / Minus
Query: 1 ctcccacagagctcaggcgaagcgaggaaccagcaggaggggagattgctcaaagctgca 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctcccacggagctcaggcgaagcgaggaaccagcaggaggggagattgctcaaagctgca 388
Query: 61 atg--aaaaaaaaaaa--gtcaaactaccttatgggaggagacttgactggagctgtgtt 116
||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 387 atgaaaaaaaaaaaaaaagtcaaactaccttatggaaggagacttgactggagctgtgtt 328
Query: 117 tggtacaggtgcggtatggtggagtagagcctaaaaggaatgctaacacttatttagccc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tggtacaggtgcggtatggtggagtagagcctaaaaggaatgctaacacttatttagccc 268
Query: 177 ttaatctaaacttagatctcattctaagacgctaaatttgaacttggaaggtttcaatga 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttaatctaaacttagatctcattctaagacgctaaatttgaacttggaaggtttcaatga 208
Query: 237 tttcactttggttggttggttggttggttggtttgttt-ggttt 279
||||||||||||||||||||||||| ||||||| || |||||
Sbjct: 207 tttcactttggttggttggttggtt---tggtttggttcggttt 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 692
Length adjustment: 9
Effective length of query: 279
Effective length of database: 683
Effective search space: 190557
Effective search space used: 190557
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
