Query= MSMg01no294_n16.b1 MSMg01no294_n16.b1 CHROMAT_FILE:
MSMg01no294_n16.b1 PHD_FILE: MSMg01no294_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:37 2005
(314 letters)
>mm_chr6_96307626_96308339
Length = 714
Score = 530 bits (274), Expect = e-155
Identities = 301/310 (97%)
Strand = Plus / Plus
Query: 5 gaattcagtgcacacatataaactgaagttctgatgcacacagcacagtgtttctcacta 64
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattaagtgcacacatataaactgaagatctgatgcacacagcacagtgtttctcacta 264
Query: 65 tctgtgttgtctgccccacatagcatatggtgactagtaagtaactgtgagatgtgtgag 124
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctgtgttgtctgtaacacttagcatatggtgactagtaagtaactgtgagatgtgtgag 324
Query: 125 catgcgtattggaggaagtgtgataaaataagctatggttcccatttgctatctctttgg 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgcgtattgaaggaagtgtgataaaataagctatggttcccatttgctatctctttgg 384
Query: 185 aagcattctaagttgatatttatcttcctacacacaaaggggagaaaaacatcaacttat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagcattctaagttgatatttatcttcctacacacaaaggggagaaaaacatcaacttat 444
Query: 245 ccctgatggatatgggaatgtgtaattgtcacattccttcgattgtgcctggtaatgagc 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 445 ccctgatggatatgggaatgtgtaattgtcacattcctttgattgtgcctggtgatgagc 504
Query: 305 tatggagagg 314
||||||||||
Sbjct: 505 tatggagagg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_n16.g1 MSMg01no294_n16.g1 CHROMAT_FILE:
MSMg01no294_n16.g1 PHD_FILE: MSMg01no294_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:37 2005
(289 letters)
>mm_chr6_96493475_96494165
Length = 691
Score = 516 bits (267), Expect = e-151
Identities = 283/289 (97%), Gaps = 2/289 (0%)
Strand = Plus / Minus
Query: 1 ctcagagaaaattagcttactcttacttcatggcatgaagctcttattcatttattgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctcagagaaaattagcttactcttacttcatggcatgaagctcttattcatttattgatt 430
Query: 61 gactgagacagtcacctcacaaaggagatactcgctcagtgctgacttctagaaggatgt 120
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 429 gactgagaccgtcacctcacaaaggagatacttgctcagtgctgacttctagaaggatgt 370
Query: 121 gcagcctcgtagctatgcatgcctggatcacagagctcagaaccagaagactttcctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gcagcctcgtagctatgcatgcctggatcacagagctcagaaccagaagactttcctcca 310
Query: 181 actggattgaagcacttggcattctcaaaaatgcaaaactaaaaatggcagaagtagaaa 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 309 actggattgaagcacttggcattctcaaaaacacaaaactaaaaatggcagaagtagaaa 250
Query: 241 aggcactatatat--aatctgttaggcagatgttacagtaagtcagcta 287
||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 249 aggcactatatataaaatctgttaggcagatgttacagtaagtcagcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 691
Length adjustment: 9
Effective length of query: 280
Effective length of database: 682
Effective search space: 190960
Effective search space used: 190960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
