Query= MSMg01no295_o20.b1 MSMg01no295_o20.b1 CHROMAT_FILE:
MSMg01no295_o20.b1 PHD_FILE: MSMg01no295_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:59 2005
(323 letters)
>mm_chr6_107005731_107006452
Length = 722
Score = 574 bits (297), Expect = e-168
Identities = 312/317 (98%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttatagttgtaaaaatgaatctaactgttgtcagagaaaacaactttaataa 63
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttatagttgtaaaaatgaatg-aactgttgtcagagaaaacaactttaataa 262
Query: 64 ctatgtgaatattatgttgaacgaagacatagtagagtacctgtcttagttagagtttta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctatgtgaatattatgttgaacgaagacatagtagagtacctgtcttagttagagtttta 322
Query: 124 ctgttgtgaacagataccatgaccaaggcaactcttataaaaaaacaacatttaattggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctgttgtgaacagataccatgaccaaggcaactcttataaaaaaacaacatttaattggg 382
Query: 184 gctggcttacgggttcagaggttcagtccattatcatcaaggtgggagcatggtagtaac 243
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gctggcttacaggttcagaggttcagtccattatcatcaaggtgggagcatggtagtaac 442
Query: 244 caggcaggcatgtcgcaggcagagctgagagttctacatcttcatccaaaggctgctagt 303
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 caggcaggcatggcgcaggcagagctgagagttctacatcttcatccaaaggctgctagt 502
Query: 304 ggaagactgacttccag 320
|||||| ||||||||||
Sbjct: 503 ggaagattgacttccag 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no295_o20.g1 MSMg01no295_o20.g1 CHROMAT_FILE:
MSMg01no295_o20.g1 PHD_FILE: MSMg01no295_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:59 2005
(696 letters)
>mm_chr6_107041698_107042793
Length = 1096
Score = 1294 bits (669), Expect = 0.0
Identities = 688/695 (98%), Gaps = 1/695 (0%)
Strand = Plus / Minus
Query: 1 actcctagtcactcccattctcggggtgtaatagtggggtgatgggcaagcaacgaatcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 actcctagtcactcccattctcggggtgtaatagtggggtgatgggcaagcaacgaatcg 696
Query: 61 ggagctgtcatgccatatcaggtgctgaaacgtcacgctgagggttataaaagcagcgcc 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 695 ggagctgtcatgccatatcaggtgctgaaacgtcacgctgcgggttataaaagcagcgcc 636
Query: 121 attttcccggttc-ggggtcttcctgagaagcaagcaataaagctcttgctgcggaagat 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 attttcccggttcgggggtcttcctgagaagcaagcaataaagctcttgctgcggaagat 576
Query: 180 tctggtttgttgcgtctttcttgccggtcgagcgggacgcaatactttcccactctgtat 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tctggtttgttgtgtctttcttgccggtcgagcgggacgcaatactttcccactctgtat 516
Query: 240 tttaagaaaattagtagaaaatatctgagacttaaaggagccagaatttttcataaataa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 515 tttaagaaaattagtagaaaatatctgagacttaaaggagccagaatttttcaaaaataa 456
Query: 300 tataaacaagttttccaactattagataaatgaatatattattattctaatataattaat 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 455 tataaacaagttttccaactattagataaatgaatacattattattctaatataattaat 396
Query: 360 gaaatctaaacacgtaaaaagtattttagagactagaaaaagagcaatagaacacagatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gaaatctaaacacgtaaaaagtattttagagactagaaaaagagcaatagaacacagatc 336
Query: 420 ccctaccacttggtatttgtgatgcaatattttaagaaactgctcagtaaatgatattca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ccctaccacttggtatttgtgatgcaatattttaagaaactgctcagtaaatgatattca 276
Query: 480 gaaaattagcttttattttaaatacatatgtaaaaatgtaggcttatttcatatttttaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gaaaattagcttttattttaaatacatatgtaaaaatgtaggcttatttcatatttttaa 216
Query: 540 ctaagaagaagacaaagtctgaaaatggattttagattgccggggaggtactggcagttg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ctaagaagaagacaaagtctgaaaatggattttagattgccggggaggtactggcagttg 156
Query: 600 taaagagtgatttatgatctatgattaaaggaaagttaatatcctcaatatataataaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 taaagagtgatttatgatctatgattaaaggaaagttaatatcctcaatatataataaga 96
Query: 660 ttctacnaatatataanaagatgaaacttgtctca 694
|||||| ||||||||| ||||||||||||||||||
Sbjct: 95 ttctacaaatatataaaaagatgaaacttgtctca 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
