Query= MSMg01no296_b02.b1 MSMg01no296_b02.b1 CHROMAT_FILE:
MSMg01no296_b02.b1 PHD_FILE: MSMg01no296_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:10 2005
(611 letters)
>mm_chr6_7342367_7343377
Length = 1011
Score = 1116 bits (577), Expect = 0.0
Identities = 601/609 (98%), Gaps = 2/609 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctctctgttacaccctggacctcagacaaactcccatcgtctatccttctagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ggaattcctctctgttacaccctggacctcagacaaactcccatcgtctatccttctagt 752
Query: 64 cctaacacatcccatttcagatcctaacctctgcccacaaagtctcaggctggctttgca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 cctaacacatcccatttcagatcctaacctctgcccacaaagtctcaggctggctttgca 692
Query: 124 tatcagtttattcaagacctccaacaggaagaacattcttactcttcaggg-gagcatgc 182
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 691 tatcagtttattcaagacctccaacaggaagaacattcttactcttcagggtca-catgc 633
Query: 183 attctcttgctgccatgatcctacaaaaccagaggggactagatctcctcatggctgaaa 242
||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 632 attctcttgctgctgtggtcctacaaaaccagaggggactagatctcctcatgactgaaa 573
Query: 243 agggaagactctccttatttctccaggagaactgtttaaatcaatggactgtagactgac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agggaagactctccttatttctccaggagaactgtttaaatcaatggactgtagactgac 513
Query: 303 cagattcctatggcataggatgctcctgttcctaatcgtcctccttatttattgctcttg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cagattcctatggcataggatgctcctgttcctaatcgtcctccttatttattgctcttg 453
Query: 363 gcctgaacaaatgcttacaaactcctttccatcaaaccagatgtccatgattcctggacc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gcctgaacaaatgcttacaaactcctttccatcaaaccagatgtccatgattcctggacc 393
Query: 423 actctgacttcagatggtgggtaccagtctttcaccagtgacatccaacatccctaaaca 482
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 392 actctgacttcagatggtgggtaccagtctttcaccaatgacatccaacatccctaaaca 333
Query: 483 gcaggaagtagcttgagaagtatgatgtctctcagctgtactttttccaccttcatgtct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gcaggaagtagcttgagaagtatgatgtctctcagctgtactttttccaccttcatgtct 273
Query: 543 gaatgctcctgctcaccttatatatagacatcctggcttaacttgctgctatccctagtt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaatgctcctgctcaccttatatatagacatcctggcttaacttgctgctatccctagtt 213
Query: 603 cccactcag 611
|||||||||
Sbjct: 212 cccactcag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_b02.g1 MSMg01no296_b02.g1 CHROMAT_FILE:
MSMg01no296_b02.g1 PHD_FILE: MSMg01no296_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:10 2005
(288 letters)
>mm_chr6_7165650_7166337
Length = 688
Score = 478 bits (247), Expect = e-139
Identities = 277/287 (96%)
Strand = Plus / Plus
Query: 1 cagagtgcaaacaagctgccttcactacatgtgccaacaagcaatgggagacaaccactg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 cagagtgcaaacaagctgccttcactacatgcgccaacaagcaatgggagacaaccactg 260
Query: 61 aatccttaagcagcactatatttaaggagctagcaatctgcaaaggcagtggttagcact 120
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 aatccttaagcagcactgtatttaaggagctagcaatctgtaaaggcagtggttagcact 320
Query: 121 cctaaaacactctggcattccagctgacaggctttactgagaaagaagtggaggaaaggc 180
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 321 cctaaaacactctggcattccagctgacaggctttattgaggaagaagtggaggaaaggc 380
Query: 181 gaaggcagctggcagagctcagtctctcccgtctggtcaggtgcctgaccacatttctga 240
||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct: 381 aaaggcagctggcagagctcagtctctcccgtctggccaggtgcccaaccacattcctga 440
Query: 241 gactggatgattcacttgagtctctcttgatagcatcctttccaacc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactggatgattcacttgagtctctcttgatagcatcctttccaacc 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
