Query= MSMg01no298_k01.b1 MSMg01no298_k01.b1 CHROMAT_FILE:
MSMg01no298_k01.b1 PHD_FILE: MSMg01no298_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:21 2005
(336 letters)
>mm_chr6_94234498_94235236
Length = 739
Score = 553 bits (286), Expect = e-162
Identities = 322/336 (95%), Gaps = 5/336 (1%)
Strand = Plus / Plus
Query: 3 cggaattcgccgcccatacgcggggtgcagtaatcggggcactggtgaggccaagacaga 62
|||||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 203 cggaattcgccgcccagaggcggggtccagtaatcggggcactggtgaggccgggacaga 262
Query: 63 aagaacagcccccaccgccaagaagccagtgcagtggtggccctagcggttttgtttatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aagaacagcccccaccgccaagaagccagtgcagtggtggccctagcggttttgtttatt 322
Query: 123 tttcagtggtttccaatgagttcctctttggtcacagacttgagaatctactagataaaa 182
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 323 tttcagtggtttccaatgagttcctctttggtcacggacttgagaatctactagataaaa 382
Query: 183 ggagctgagttggagcca----gagagatgaggatgtcactgaggtgggtaggagagaat 238
|||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||
Sbjct: 383 ggagctgagttggagccactcagagagatgaggatgtcactgaggtgggtcg-agaggat 441
Query: 239 aggtctgaagttcagattccgcaggcatcttaagtacaacattaagtgaagaccttccac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aggtctgaagttcagattccgcaggcatcttaagtacaacattaagtgaagaccttccac 501
Query: 299 ttgccaaggctggaggaatacaatcacccccacccc 334
||||||||||||||||||||||||||| ||||||||
Sbjct: 502 ttgccaaggctggaggaatacaatcactcccacccc 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 739
Length adjustment: 9
Effective length of query: 327
Effective length of database: 730
Effective search space: 238710
Effective search space used: 238710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_k01.g1 MSMg01no298_k01.g1 CHROMAT_FILE:
MSMg01no298_k01.g1 PHD_FILE: MSMg01no298_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:21 2005
(246 letters)
>mm_chr6_94342926_94343572
Length = 647
Score = 447 bits (231), Expect = e-130
Identities = 243/247 (98%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1 attccgaggacgtttccttctattc-caaaggcatccacttccttgttcggtaattaatg 59
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 447 attccgaggacgtttccttctattcacaaaggcatccacttccttgttcggtaattaatg 388
Query: 60 gcaccctgggagcagagggaacacagcagaacagggacagtaatagttgtccctggccat 119
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 387 gcaccctgggagcagagggaacgcggcagaacagggacagtaatagttgtccctggccat 328
Query: 120 gtaatagagtgtgagaggttatctatctcaacaggatatctgtgtttaaatggcaagaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtaatagagtgtgagaggttatctatctcaacaggatatctgtgtttaaatggcaagaga 268
Query: 180 taaagagaccaggcccagttgctctgctctgcggtctaactggaaggaaatccacagaaa 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 267 taaagagaccaggcccagttgctctgctctgtggtctaactggaaggaaatccacagaaa 208
Query: 240 tggactt 246
|||||||
Sbjct: 207 tggactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
