Query= MSMg01no298_k13.b1 MSMg01no298_k13.b1 CHROMAT_FILE:
MSMg01no298_k13.b1 PHD_FILE: MSMg01no298_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:23 2005
(249 letters)
>mm_chr6_137697354_137698002
Length = 649
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 ctagggagatggcccggtggtttcaagagcatccatacaaaaagaaataaagcttggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagggagatggcccggtggtttcaagagcatccatacaaaaagaaataaagcttggtag 260
Query: 61 aaggcagtatgaagaatttaaaagttatccatctaattgtttatagtattacttgatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggcagtatgaagaatttaaaagttatccatctaattgtttatagtattacttgatcct 320
Query: 121 taccactgaaaacatgtttttggtttaaaaaaccaacaaacaaaacaaaaatcccaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taccactgaaaacatgtttttggtttaaaaaaccaacaaacaaaacaaaaatcccaaata 380
Query: 181 cttattattgatcccagagtggctgttgtactaaaggtgactttgagatgtcttttagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttattattgatcccagagtggctgttgtactaaaggtgactttgagatgtcttttagaa 440
Query: 241 tcacagtg 248
||||||||
Sbjct: 441 tcacagtg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no298_k13.g1 MSMg01no298_k13.g1 CHROMAT_FILE:
MSMg01no298_k13.g1 PHD_FILE: MSMg01no298_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:23 2005
(630 letters)
>mm_chr6_137859886_137860914
Length = 1029
Score = 704 bits (364), Expect = 0.0
Identities = 367/368 (99%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 262 gcaaaagccagtagtcaatatctcaaaaagactagatcccttggccttggtatggccacc 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 gcaaaagccagtagtcaatatctcaaaaagactagatcccttggccttggtatggccacc 970
Query: 322 ttgtttgtgggccataacagctaccacagtccttctgaatgactcagacaaacttaaatt 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ttgtttgtgggccataacagctaccacagtccttctgaatgactcagacaaacttaaatt 910
Query: 382 gggacaaactctaattatgatgacccaccccacccatgcagtagattctctgctcaggga 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 gggacaaactctaattatgatgacccaccccacccatgcagtagattctctgctcaggga 850
Query: 442 tgcaactgactggtggatatcacatgacatttcaaatcagtatcaaactctcattctaga 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tgcaactgactggtggatatcacatgacatttcaaatcagtatcaaactctcattctaga 790
Query: 502 caaaaagcagtctgacttttagaaagtattcggccattaaccctgacaccctgctgctgg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 caaaaagcagtctgacttttagaaagtattcggccattaaccctgacaccctgctgctgg 730
Query: 562 atgatagccctttaggaaccaggcctaaactgtcttgaaatgttaaatgttatccaaggt 621
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atgatagccc-ttaggaaccaggcctaaactgtcttgaaatgttaaatgttatccaaggt 671
Query: 622 attcaatc 629
||||||||
Sbjct: 670 attcaatc 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1029
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1019
Effective search space: 631780
Effective search space used: 631780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
