Query= MSMg01no298_n22.b1 MSMg01no298_n22.b1 CHROMAT_FILE:
MSMg01no298_n22.b1 PHD_FILE: MSMg01no298_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:38 2005
(523 letters)
>mm_chr6_149166761_149167683
Length = 923
Score = 949 bits (491), Expect = 0.0
Identities = 517/531 (97%), Gaps = 9/531 (1%)
Strand = Plus / Plus
Query: 1 tacttgaagaaatgcaaggcatattttttgggggggaaaaaaagaatgcggctcaggttt 60
||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||
Sbjct: 201 tacttgaagaaatgcaaggcatattttttgggggggaaaaaaaaaaggcggttcaggttt 260
Query: 61 taggattctagttcccagaacttttcagagaaaagaacaaacatatggtgtctcaaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggattctagttcccagaacttttcagagaaaagaacaaacatatggtgtctcaaggag 320
Query: 121 aaacacccttctatggtggcttgagtaagagtgtcttccataggtgcctatatt------ 174
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 aaacacccttctatggtggcttgagtaagagtgttttccataggtgcctatatttgaatg 380
Query: 175 ---ggttatcaggaagtggcactatttgtgaaggattaggagtagttatggttttgtttg 231
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttggttatcaggaagtggcactatttgtgaaggattaggagtagttatggttttgtttg 440
Query: 232 aggaagtgtatctctgggagtgtttagggttcttaaagctctgcccagtgtcagtgtctc 291
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaagtgtatctctgggagtggttagggttcttaaagctctgcccagtgtcagtgtctc 500
Query: 292 tctctctttttattactgcctgtggacctggacctagatctctgcagcaaaatgtctctc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctctctttttattactgcctgtggacctggacctagatctctgcagcaaaatgtctctc 560
Query: 352 ccttgcttcctgccataacaacaatggactaaacctctgaaactgtaaaatagccccact 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttgcttcctgccataacaacaatggactaaacctctgaaactgtaaaatagccccact 620
Query: 412 taaattcttcttatattagacttgcagtggtcatgtatgtcctttcagcaatagaacact 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaattcttcttatattagacttgcagtggtcatgtatgtcctttcagcaatagaacact 680
Query: 472 aagacactcttccaagcatgtgtttcttaccacttatctcattttaaattg 522
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagacactcttccaagcatgtgtttcttaccacttatctcattttaaattg 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_n22.g1 MSMg01no298_n22.g1 CHROMAT_FILE:
MSMg01no298_n22.g1 PHD_FILE: MSMg01no298_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:38 2005
(524 letters)
>mm_chr6_149314170_149315093
Length = 924
Score = 663 bits (343), Expect = 0.0
Identities = 365/379 (96%), Gaps = 12/379 (3%)
Strand = Plus / Minus
Query: 143 ggatgtgttctactactcggcctattgtggttttatttgaattcctttgatgactaatgg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ggatgtgttctactactcggcctattgtggttttatttgaattcctttgatgactaatgg 865
Query: 203 ttttgaacattttctcacatctgttttttcttttctttttcttttttttattaagagata 262
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 864 ttttgaacattttctcacatctgttttttcttttctttttc-tttttttaaaaagagata 806
Query: 263 tctatccagatcatgtgtccatttaaaattggattatttattttgttattgctgattttt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tctatccagatcatgtgtccatttaaaattggattatttattttgttattgctgattttt 746
Query: 323 gtttttgttttttgtttgtttgtttgttttttgttgttacaaaggcatcttgtttattct 382
||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 745 gtttttgttttttgt-----------ttttttgttgttacaaaggcatcttgtttattct 697
Query: 383 tatcagcatcactgactctcagggttcacatttcccaacaccgctcctctccatacagta 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tatcagcatcactgactctcagggttcacatttcccaacaccgctcctctccatacagta 637
Query: 443 gttaatgtgcaatctcacttgtgggcctgggaagggtgggggctcggctctgggtgggga 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gttaatgtgcaatctcacttgtgggcctgggaagggtgggggctcggctctgggtgggga 577
Query: 503 gggcattggcagttcacac 521
|||||||||||||||||||
Sbjct: 576 gggcattggcagttcacac 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
