Query= MSMg01no298_o22.b1 MSMg01no298_o22.b1 CHROMAT_FILE:
MSMg01no298_o22.b1 PHD_FILE: MSMg01no298_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:43 2005
(652 letters)
>mm_chr6_75617160_75618212
Length = 1053
Score = 1234 bits (638), Expect = 0.0
Identities = 650/655 (99%), Gaps = 3/655 (0%)
Strand = Plus / Plus
Query: 1 tattgacattctgaaggaattactgattgatttatttatagaagactcaccagtctaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tattgacattctgaaggaattactgattgatttatttatagaagactcaccagtctaaac 258
Query: 61 tactaaagttaaaataaattttcttagaacagcattttaaacagataagaaagaattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tactaaagttaaaataaattttcttagaacagcattttaaacagataagaaagaattaaa 318
Query: 121 tgatgggaatatttgatcataataatgaatatataatatagtgaataaatacatgaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgatgggaatatttgatcataataatgaatatataatatagtgaataaatacatgaatat 378
Query: 181 atatgtatatataaaaaattccat--gttacttgatacaaattatatatattatatttca 238
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 379 atatgtatatataaaaaattccatatgttacttgatacaaattatatatattatatttca 438
Query: 239 actgcatttactacattgattttatcatttacatttaataattatatatagtatatgaat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 actgcatttactacattgattttatcatttacatttaataattatatatagtatatgaat 498
Query: 299 tttaatataaattttatctatttaattataacatataaattaaatatttttctcactgat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttaatataaattttatctatttaattataacatataaattaaatatttttctcactgat 558
Query: 359 gtgcaaatttctttttattcctattttattatgctaataaatatagcatggggttagaaa 418
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 559 gtgcaaatttctttttattcctattttattatgctaatagatatagcatggggttagaaa 618
Query: 419 ttattatactactttttctgaagtcaatttatgaagatatgaggtttcaaaaagtaaaac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttattatactactttttctgaagtcaatttatgaagatatgaggtttcaaaaagtaaaac 678
Query: 479 aaccagtgagccaaacaaaaagaaaagacccataaaatctgaggccttttgagaaattca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aaccagtgagccaaacaaaaagaaaagacccataaaatctgaggccttttgagaaattca 738
Query: 539 gtaagatgaaaatcttctgtctcttgggtcanaaaggaaatgattgtggtaattttagcc 598
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 739 gtaagatgaaaatcttctgtctcttgggtcaaaaaggaaatgattgtggtaattttagcc 798
Query: 599 tacttaaaaa-ttatatgttccaagggagagtgagggaataaacagttggctggt 652
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tacttaaaaaattatatgttccaagggagagtgagggaataaacagttggctggt 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1053
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1043
Effective search space: 669606
Effective search space used: 669606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_o22.g1 MSMg01no298_o22.g1 CHROMAT_FILE:
MSMg01no298_o22.g1 PHD_FILE: MSMg01no298_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:43 2005
(343 letters)
>mm_chr6_75793445_75794187
Length = 743
Score = 505 bits (261), Expect = e-147
Identities = 325/357 (91%), Gaps = 24/357 (6%)
Strand = Plus / Minus
Query: 1 ttttggtgatgaacagcagtgtagaagtgtaagctgaataaaccctttttcc-c-ccaac 58
||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||
Sbjct: 533 ttttggtgatgaacagcagtgtagaagtgtaagctgaataaaccc--tttcctctccaac 476
Query: 59 ttgcttcatgaccatggtattttgtgcaggaatagcaaccctgactaaaacggaagctgc 118
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttgcttcatgaccatggtattttgtgcaggaatagcaaccctgactaaaacggaagctga 416
Query: 119 tttaggactgattacctttgctttgatacaaaagtaggtcattcataagttcactatgaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tttaggactgattacctttgctttgatacaaaagtaggtcattcataagttcactatgaa 356
Query: 179 atttgaactgtatttatgtccccaaactagggagtggcagtatgattgtgtgtgtgtgca 238
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 355 atttgaactgtatttatgtccccaaactagggagtggcagtatgattttgtgtgtgtg-- 298
Query: 239 agtgtgtgggtacttgtgtgtgagtatgtgtgtatgtgtgtgtgtg--caagtgtgtggg 296
|||||| || ||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 297 --tgtgtgtgt----gtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgcaagtgtgtggg 244
Query: 297 tacctgtgtgtgtgtg----tgtgtg------tgtgtgtgtgtgtgtgtatgtgtgt 343
||| |||||||||||| |||||| |||||||||| |||||| |||||||
Sbjct: 243 tacttgtgtgtgtgtgcaagtgtgtgggtacttgtgtgtgtgcgtgtgtgtgtgtgt 187
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 114
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
