Query= MSMg01no299_l01.b1 MSMg01no299_l01.b1 CHROMAT_FILE:
MSMg01no299_l01.b1 PHD_FILE: MSMg01no299_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:41 2005
(327 letters)
>mm_chr6_19856649_19857375
Length = 727
Score = 605 bits (313), Expect = e-177
Identities = 319/321 (99%)
Strand = Plus / Plus
Query: 5 gaattcttgggtagagacgatattagtatggtcaaaattgagaaagtgggaatgggtggg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgggtagagacgatattagtatggtcaaaattgagaaagtgggaatgggtggg 264
Query: 65 aggagaaccctcatagaggtctgggaaagggggtttctgaagaggagacctggaaatgtg 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 aggagaaccctcatagaggtctgggaaaggggatttctgaagaggagacctggaaatgtg 324
Query: 125 aaaacatttgaaatgtaaataaagaaaatatagaagaaaaacaatttagaaagttgtagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaacatttgaaatgtaaataaagaaaatatagaagaaaaacaatttagaaagttgtagg 384
Query: 185 taggtcagatactgagagttcaaattataattattttgtgcacagttttattagtacatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taggtcagatactgagagttcaaattataattattttgtgcacagttttattagtacatt 444
Query: 245 tcaggtagttgtatgtctgcatttactgaaaagttagtggtacttattaatccaaaagaa 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 tcaggtagttgtatgtctgcatttactgaaaagttagtggtacttatcaatccaaaagaa 504
Query: 305 gagctgaagggaaaatctgta 325
|||||||||||||||||||||
Sbjct: 505 gagctgaagggaaaatctgta 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_l01.g1 MSMg01no299_l01.g1 CHROMAT_FILE:
MSMg01no299_l01.g1 PHD_FILE: MSMg01no299_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:41 2005
(653 letters)
>mm_chr6_20026968_20028025
Length = 1058
Score = 1203 bits (622), Expect = 0.0
Identities = 648/658 (98%), Gaps = 5/658 (0%)
Strand = Plus / Minus
Query: 1 tgtacatggctagcatgagaatctttaatttttcaaataacttgaaatgacatacttata 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 858 tgtacatggctagcatgagaatctttaatttttcaaatagcttgaaatgacatacttata 799
Query: 61 tttaaagtatgtaattttctgctgttaattccttagtacaaagactgttgaaatgtatac 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ttgaaagtatgtaattttctgctgttaattccttagtacaaagactgttgaaatgtatac 739
Query: 121 tataatataaattcattttaactcttgcattcttccaatcatggaaaaatacatcaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tataatataaattcattttaactcttgcattcttccaatcatggaaaaatacatcaactg 679
Query: 181 attctttcatgaataagaaaaattctcattataagacaacaaacactcacacaccaatta 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 678 attctttcatgaataagaaaaattctcattataagacaacaaagactcacacaccaatta 619
Query: 241 acaatttctttctacctttcaaaactaagaaccagttagtaaggagaaaagattattttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acaatttctttctacctttcaaaactaagaaccagttagtaaggagaaaagattattttt 559
Query: 301 gaaatcctctttgagtctaagaaaaagtgcaactgctacaaattcaagtaacataagctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gaaatcctctttgagtctaagaaaaagtgcaactgctacaaattcaagtaacataagctt 499
Query: 361 gtctactgagtgacagttcatattctaaaaattgtcgcacttacatttgaatctaattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtctactgagtgacagttcatattctaaaaattgtcgcacttacatttgaatctaattta 439
Query: 421 attcttcttcaaccagcatgatatctctaaacagatgctctgaaggaagtcattcatatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 attcttcttcaaccagcatgatatctctaaacagatgctctgaaggaagtcattcatatc 379
Query: 481 tactctgtttatatcatgtttcttggcgttctgtcttccttttactttattgattctcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tactctgtttatatcatgtttcttggcgttctgtcttccttttactttattgattctcac 319
Query: 541 accttagcagtagtcctgtaattcatgactggttcagtaaatc-t---atga-ctcatca 595
||||||||||||||||||||||||||||||||||||||||||| | || | |||||||
Sbjct: 318 accttagcagtagtcctgtaattcatgactggttcagtaaatcatcaaataagctcatca 259
Query: 596 aataagctaagtacaaaattgcttgtctataccctaactagatgagttatatattagc 653
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 258 aataagctaagtacaaaattgcttgtctataccctaactagattagttatatattagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1058
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1048
Effective search space: 673864
Effective search space used: 673864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
