Query= MSMg01no299_l11.b1 MSMg01no299_l11.b1 CHROMAT_FILE:
MSMg01no299_l11.b1 PHD_FILE: MSMg01no299_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:43 2005
(168 letters)
>mm_chr6_112769712_112770278
Length = 567
Score = 296 bits (153), Expect = 5e-85
Identities = 159/161 (98%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgttccaggacataggaagtcacagaggttatttacaagtttaaccaatgtgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgttccaggacataggaagtcacagaggttatttacaagtttaaccaatgtgt 264
Query: 65 gttttgggaaaaaaaatcactgagagaaattggatggtgtgtagggacataatggttaga 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttt-ggaaaaaaaatcactgagagaaattggatggtgtgtagggacataatggttaga 323
Query: 125 tggatggatagacgaatgagtggggtagatatgtaggtagg 165
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 tggatggatagacggatgagtggggtagatatgtaggtagg 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 567
Length adjustment: 8
Effective length of query: 160
Effective length of database: 559
Effective search space: 89440
Effective search space used: 89440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no299_l11.g1 MSMg01no299_l11.g1 CHROMAT_FILE:
MSMg01no299_l11.g1 PHD_FILE: MSMg01no299_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:43 2005
(293 letters)
>mm_chr6_112935421_112936112
Length = 692
Score = 542 bits (280), Expect = e-158
Identities = 289/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 attatcagttaataaatgcattttgttcgatagaaagtgtttcaaagcgtagtctttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 attatcagttaataaatgcattttgttcgatagaaagtgtttcaaagcgtagtctttgtg 376
Query: 61 aagtgaggaaaaaataagatgttttattttggtggaaccactgggaatcaatgagagggg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagtgagg-aaaaataagatgttttattttggtggaaccactgggaatcaatgagagggg 317
Query: 121 tgttcttactggatgagaagattgaggagggcagagagcagaggaggcttcctggggagc 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 316 tgttcttactggatgagaagattgaggagggcagagagtagaggaggcttcctggggagc 257
Query: 181 agagaagatgagtctcccctaagtagggtttggggcacaaacgggacttatttattcagt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 256 agagaagatgagtctcccctaagtagggtttggggcacagacgggacttatttattcagt 197
Query: 241 ggctctcagagagtgctctggatcaacagcaccagttccttctgggaacttg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ggctctcagagagtgctctggatcaacagcaccagttccttctgggaacttg 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
