Query= MSMg01no300_a24.b1 MSMg01no300_a24.b1 CHROMAT_FILE:
MSMg01no300_a24.b1 PHD_FILE: MSMg01no300_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:09 2005
(319 letters)
>mm_chr6_9065618_9066336
Length = 719
Score = 617 bits (319), Expect = 0.0
Identities = 319/319 (100%)
Strand = Plus / Minus
Query: 1 gtattttttacctttctacccattctggccatggtacttgtagagttaacctgttcttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gtattttttacctttctacccattctggccatggtacttgtagagttaacctgttcttca 460
Query: 61 tagctgagcacagagtagatacaagtgcttgaattcagtgttggagagatgaagacagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tagctgagcacagagtagatacaagtgcttgaattcagtgttggagagatgaagacagta 400
Query: 121 aaggcatcaagataataaggtaatcccaaaagaatgtacaggaaaacatgaatcagtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aaggcatcaagataataaggtaatcccaaaagaatgtacaggaaaacatgaatcagtaaa 340
Query: 181 tatatcacatactcagaagttctgcctcaatatgacaatggaagcctactttacttatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tatatcacatactcagaagttctgcctcaatatgacaatggaagcctactttacttatga 280
Query: 241 agctgtaaggccaggatggaagccatgagttacagtgttcactatgataacactatggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 agctgtaaggccaggatggaagccatgagttacagtgttcactatgataacactatggag 220
Query: 301 gttgagatgttttctaagt 319
|||||||||||||||||||
Sbjct: 219 gttgagatgttttctaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_a24.g1 MSMg01no300_a24.g1 CHROMAT_FILE:
MSMg01no300_a24.g1 PHD_FILE: MSMg01no300_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:09 2005
(291 letters)
>mm_chr6_8915391_8916081
Length = 691
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Plus
Query: 1 ttttccttgcaatttggataataagaccctgatacatccttgtatttaattgtcatgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttccttgcaatttggataataagaccctgatacatccttgtatttaattgtcatgatt 260
Query: 61 ttgattgttaatgacatttgattgcttcttctggaggcacctgtcagccatttctgaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgattgttaatgacatttgattgcttcttctggaggcacctgtcagccatttctgaagc 320
Query: 121 acagatgtctttatcagcatcaggaggaatttctttcccttactgaccttgagctacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagatgtctttatcagcatcaggaggaatttctttcccttactgaccttgagctacaca 380
Query: 181 gctaatttggggaagatgagcaagttttctgtttgcctttgagagcttattttgcttatt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gctaatttggggaagatgagcaagttttctgtctgcctttgagagcttattttgcttatt 440
Query: 241 gaacaatgatttgagatcactctttttcaaaagcttctaggttattattct 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacaatgatttgagatcactctttttcaaaagcttctaggttattattct 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
