Query= MSMg01no301_p03.b1 MSMg01no301_p03.b1 CHROMAT_FILE:
MSMg01no301_p03.b1 PHD_FILE: MSMg01no301_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:28 2005
(323 letters)
>mm_chr6_51782702_51783424
Length = 723
Score = 495 bits (256), Expect = e-144
Identities = 301/320 (94%), Gaps = 7/320 (2%)
Strand = Plus / Plus
Query: 4 ggaattcctacagggcaatctaacttagtccctcagagggactcctattctgggtgctgc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctacagggcaatctaacttagtccctcagagggactcctattctgggtgctgc 263
Query: 64 tagatctcaccaagttgatgagcgattaagcatcacattaacttctgtaaacgagtaagt 123
|||||||||||||||||| ||| |||||||||||| | ||| ||||||||| |||||| |
Sbjct: 264 tagatctcaccaagttgacgagagattaagcatcatactaatttctgtaaatgagtaact 323
Query: 124 atatgaaagggtaagcggtgtagagacagaagtagctaatctaattggctgtgggatgca 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 324 atatgaaagggtaagcggtgtagagacagaagtagctaatctaattgactgtgggatgca 383
Query: 184 acgtccctcctgcatactgtaaagctaagggcagagctgtgatgcatacagtgctgctca 243
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 384 acgtcccttctgcatactgtaaagctaagggcggagctgtgatgcatacagtgctgctca 443
Query: 244 caggggcacgtaccctgtaccctcggtgctgagacaccattacatacaggacaattccgc 303
|||||||||||||||| ||||||||||||||||||||| |||||| ||||||||
Sbjct: 444 caggggcacgtaccct-------cggtgctgagacaccattacacacaggagaattccgc 496
Query: 304 gagtaagtgcacacactgta 323
||||||||||||||||||||
Sbjct: 497 gagtaagtgcacacactgta 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_p03.g1 MSMg01no301_p03.g1 CHROMAT_FILE:
MSMg01no301_p03.g1 PHD_FILE: MSMg01no301_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:28 2005
(654 letters)
>mm_chr6_51941569_51942622
Length = 1054
Score = 1226 bits (634), Expect = 0.0
Identities = 649/654 (99%)
Strand = Plus / Minus
Query: 1 actggactggaagacatgtattggctcttcttgtcaatgacaggtcgaaggatccctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 actggactggaagacatgtattggctcttcttgtcaatgacaggtcgaaggatccctgtg 602
Query: 61 gacatttgttacaaatctgagtcagggctagaccataatcacttcgtggatacgaatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacatttgttacaaatctgagtcagggctagaccataatcacttcgtggatacgaatctg 542
Query: 121 gaacctctagggtgagagtgtaggagacctaatgtgagacagaagtaaagagaagtcatt 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 541 gaacctctagggtgagagtgtaggagagctaatgtgagacagaagtaaagagaagtcatt 482
Query: 181 atgtgcttcctcctaattagaagtcccagtaaaatatgggacaagcagggcactggcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgtgcttcctcctaattagaagtcccagtaaaatatgggacaagcagggcactggcaaa 422
Query: 241 ggcgtgtactcatatgcactgagatttgtctgtaagctattccttaaagcttggagagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 421 ggcgtgtactcatatgcactgagatttgtctgtaagctattccttaaagcttggagaata 362
Query: 301 agaaaaaggctaaactatttggatcataatttatgatatcaatgaacatttttcttcttt 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 agaaaaaggctaaactatttggatcataatttttgatatcaatgaacatttttcttcttt 302
Query: 361 tttaaatataccttcccttaaaaactccagtatataaaaatttggatttatgaaacatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttaaatataccttcccttaaaaactccagtatataaaaatttggatttatgaaacatga 242
Query: 421 acactacttcttccaaaagactacttaaaaaaggatggtctgggccaggaggatggctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acactacttcttccaaaagactacttaaaaaaggatggtctgggccaggaggatggctta 182
Query: 481 gtgggttaaggtactcactgctaaacctaattgtctgaattcagttctagcccacatggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgggttaaggtactcactgctaaacctaattgtctgaattcagttctagcccacatggt 122
Query: 541 ggaagaagacaactgattgctccaagttgttctctgatctcttcacaagtcccatgacac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaagaagacaactgattgctccaagttgttctctgatctcttcacaagtcccatgacac 62
Query: 601 atgtgaatgtgtgcgcatgtatgcacacacacatgcacacccacccacacaaac 654
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 atgtgaatgtgtgtgcatgtatgtacacacacatgcacacccacccacacaaac 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
