Query= MSMg01no305_d18.b1 MSMg01no305_d18.b1 CHROMAT_FILE:
MSMg01no305_d18.b1 PHD_FILE: MSMg01no305_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:54 2005
(461 letters)
>mm_chr6_18819073_18819936
Length = 864
Score = 797 bits (412), Expect = 0.0
Identities = 450/464 (96%), Gaps = 3/464 (0%)
Strand = Plus / Minus
Query: 1 acacgaagtcacttggaagcagatgattcagtgcttttcaaaccctgcctcctggaagcc 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 acacaaagtcacttggaagcagatgattcagtgcttttcaaaccctgcctcctggaagcc 605
Query: 61 tcctgctttcaagaggtctcaaaattccataggcgggactgttgggcaccctagttcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tcctgctttcaagaggtctcaaaattccataggcgggactgttgggcaccctagttcttc 545
Query: 121 cctcccattaactacaacactggctcctatgtaagatttgaaagttattataaatgatga 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 544 tctcccattaactacaacactggctcctatgcaagatttgaaagttattataaatgatga 485
Query: 181 taataacttacagctacccaaataattaagtagtttgattttatagattgaaaaaaa--- 237
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 484 taataacttacagctacccaaataattaagcagtttgattttatagatcgaaaaaaaaaa 425
Query: 238 ggaacatttgagaagtataggtaatttgccctaaatcataccaggtggttaaaatatcac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggaacatttgagaagtataggtaatttgccctaaatcataccaggtggttaaaatatcac 365
Query: 298 agatgtataataaatgaatatattcatagttatatagtattattaataagctgtaattac 357
||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 364 agatgtataattaatgaatatattcatatttatatattattattaataagctgtaattac 305
Query: 358 attatatcctatttagtattatttattatacctatacctgtggtttttatctgatgcatt 417
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atgacatcctatttagtattatttattatacctatacctgtggtttttatctgatgcatt 245
Query: 418 tacatctgctcctttcttcaaaaggaattttaccatattttcat 461
|||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 244 tacatctgctcctttcttcagaaggaattttaccatattttcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 864
Length adjustment: 10
Effective length of query: 451
Effective length of database: 854
Effective search space: 385154
Effective search space used: 385154
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_d18.g1 MSMg01no305_d18.g1 CHROMAT_FILE:
MSMg01no305_d18.g1 PHD_FILE: MSMg01no305_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:54 2005
(119 letters)
>mm_chr6_18759599_18760117
Length = 519
Score = 215 bits (111), Expect = 9e-61
Identities = 117/119 (98%)
Strand = Plus / Plus
Query: 1 gccaagacaacaagttatctcaatttgctagctaggtgaacatttgaaagtaggacatct 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 gccaagacaacaagttatctcaatttgctagctaggtgaacatatgaaagtaggacatct 260
Query: 61 tcttgggcagtgtgcaacaaactagaacaactctgggttatatgatgcacatgtgtaaa 119
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttgggaagtgtgcaacaaactagaacaactctgggttatatgatgcacatgtgtaaa 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
