MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-305J05
Chromosome	6 (Build37)
Map Location	81,925,883 - 82,093,224
singlet/doublet	doublet
Overlap gene	Tmem166
Upstream gene	LOC100042991, LOC232143, 1700009C05Rik, AW146020, Mrpl19
Downstream gene	EG622198, Tacr1, Pole4, LOC100043412, Hk2, EG622318, Sema4f, D6Mm5e, Dok1, Loxl3, Htra2, Aup1, Dqx1, Tlx2, Pcgf1, Lbx2, A230058J24Rik, Mrpl53, Gcs1, Wbp1, Znhit4, Rtkn
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042991 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042991
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	LOC232143 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:232143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins pseudo : _no_value

name	1700009C05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74220 MGI:1921470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	AW146020 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330361 MGI:2141656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56284 MGI:1926274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem166 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232146 MGI:2385247
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622198 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622198 MGI:3648353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Tacr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21336 MGI:98475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pole4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66979 MGI:1914229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043412 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs

name	Hk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15277 MGI:1315197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622318 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622318 MGI:3646278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Sema4f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20355 MGI:1340055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D6Mm5e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110958 MGI:1315200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dok1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13448 MGI:893587
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Loxl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16950 MGI:1337004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64704 MGI:1928676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aup1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11993 MGI:107789
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dqx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93838 MGI:2136388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tlx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21909 MGI:1350935
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcgf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69837 MGI:1917087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lbx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16815 MGI:1342288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230058J24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243510 MGI:3045292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl53 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68499 MGI:1915749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gcs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57377 MGI:1929872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22377 MGI:104710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Znhit4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70020 MGI:1917270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rtkn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20166 MGI:107371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	1700009C05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377942 GeneID:74220 MGI:1921470
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 1700009C05 gene transcript_id : XM_896866.2

name	AW146020 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608162 GeneID:330361 MGI:2141656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW146020 transcript_id : NM_177884.3

name	Mrpl19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608147 GeneID:56284 MGI:1926274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L19 transcript_id : NM_026490.2

name	Tmem166 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704145 GeneID:232146 MGI:2385247
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 166 transcript_id : NM_145570.1

name	Tacr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892945 GeneID:21336 MGI:98475
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tachykinin receptor 1 transcript_id : NM_009313.4

name	Pole4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350372 GeneID:66979 MGI:1914229
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA-directed), epsilon 4 (p12 subunit) transcript_id : NM_025882.2

name	LOC100043412 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255266 GeneID:100043412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 72 ESTs product : hypothetical protein LOC100043412 transcript_id : XM_001479664.1

name	Hk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892208 GeneID:15277 MGI:1315197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hexokinase 2 transcript_id : NM_013820.2

name	Sema4f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543684 GeneID:20355 MGI:1340055
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain transcript_id : NM_011350.2

name	D6Mm5e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14861845 GeneID:110958 MGI:1315200
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 6, Miriam Meisler 5, expressed transcript_id : NM_033079.1

name	Dok1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981795 GeneID:13448 MGI:893587
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : docking protein 1 transcript_id : NM_010070.3

name	Loxl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802822 GeneID:16950 MGI:1337004
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysyl oxidase-like 3 transcript_id : NM_013586.3

name	Htra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980990 GeneID:64704 MGI:1928676
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HtrA serine peptidase 2 transcript_id : NM_019752.2

name	Aup1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90403600 GeneID:11993 MGI:107789
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ancient ubiquitous protein transcript_id : NM_007517.3

name	Dqx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130827 GeneID:93838 MGI:2136388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAQ RNA-dependent ATPase transcript_id : NM_033606.3

name	Tlx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70912930 GeneID:21909 MGI:1350935
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell leukemia, homeobox 2 transcript_id : NM_009392.2

name	Pcgf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574110 GeneID:69837 MGI:1917087
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polycomb group ring finger 1 transcript_id : NM_197992.1

name	Lbx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130088 GeneID:16815 MGI:1342288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ladybird homeobox homolog 2 (Drosophila) transcript_id : NM_010692.3

name	A230058J24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486906 GeneID:243510 MGI:3045292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A230058J24 gene transcript_id : NM_001081266.1

name	Mrpl53 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133506706 GeneID:68499 MGI:1915749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L53 transcript_id : NM_026744.3

name	Gcs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981105 GeneID:57377 MGI:1929872
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucosidase 1 transcript_id : NM_020619.2

name	Wbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:145046223 GeneID:22377 MGI:104710
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WW domain binding protein 1 transcript_id : NM_001083923.1

name	Wbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:145046261 GeneID:22377 MGI:104710
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WW domain binding protein 1 transcript_id : NM_001083922.1

name	Wbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:145046241 GeneID:22377 MGI:104710
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WW domain binding protein 1 transcript_id : NM_016757.2

name	Znhit4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963728 GeneID:70020 MGI:1917270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, HIT type 4 transcript_id : NM_023547.1

name	Rtkn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677826 GeneID:20166 MGI:107371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : rhotekin transcript_id : NM_009106.1

name	Rtkn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281637 GeneID:20166 MGI:107371
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : rhotekin transcript_id : NM_133641.1

name	1700009C05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029284 GeneID:74220 MGI:1921470
definition	codon_start : 1 product : hypothetical protein LOC74220 protein_id : XP_901959.1

name	AW146020 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608163 CCDS:CCDS20260.1 GeneID:330361 MGI:2141656
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : hypothetical protein LOC330361 protein_id : NP_808552.2

name	Mrpl19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385976 GeneID:56284 MGI:1926274
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005761 - mitochondrial ribosome [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence ISS] [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence ISS] [Evidence IEA] codon_start : 1 note : ribosomal protein, mitochondrial, L15 product : mitochondrial ribosomal protein L19 protein_id : NP_080766.1

name	Tmem166 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704146 CCDS:CCDS20261.1 GeneID:232146 MGI:2385247
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC232146 protein_id : NP_663545.1

name	Tacr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543840 CCDS:CCDS20262.1 GeneID:21336 MGI:98475
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0048265 - response to pain [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : NK1 receptor; neurokinin receptor 1; substance p receptor product : tachykinin receptor 1 protein_id : NP_033339.2

name	Pole4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385366 GeneID:66979 MGI:1914229
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : DNA polymerase epsilon subunit 4 protein_id : NP_080158.1

name	LOC100043412 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255267 GeneID:100043412
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479714.1

name	Hk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305143 CCDS:CCDS20263.1 GeneID:15277 MGI:1315197
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004396 - hexokinase activity [Evidence IMP]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046835 - carbohydrate phosphorylation [Evidence IMP]; GO:0006006 - glucose metabolism [Evidence IMP]; GO:0006096 - glycolysis [Evidence IEA] codon_start : 1 product : hexokinase 2 protein_id : NP_038848.1

name	Sema4f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543685 CCDS:CCDS20264.1 GeneID:20355 MGI:1340055
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0000299 - integral to membrane of membrane fraction [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence ISS]; GO:0045202 - synapse [Evidence ISS]; GO:0019717 - synaptosome [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030517 - negative regulation of axon extension [Evidence ISS]; GO:0007399 - nervous system development [Evidence IEA]; GO:0031290 - retinal ganglion cell axon guidance [Evidence ISS] codon_start : 1 exception : mismatches in translation note : Sema W product : sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain protein_id : NP_035480.2

name	D6Mm5e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14861846 GeneID:110958 MGI:1315200
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC110958 protein_id : NP_149070.1

name	Dok1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981796 CCDS:CCDS20265.1 GeneID:13448 MGI:893587
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005158 - insulin receptor binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005066 - transmembrane receptor protein tyrosine kinase signaling protein activity [Evidence IPI] GO_process : GO:0000165 - MAPKKK cascade [Evidence TAS]; GO:0007243 - protein kinase cascade [Evidence IPI]; GO:0007265 - Ras protein signal transduction [Evidence IPI]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IPI] codon_start : 1 exception : mismatches in translation note : downstream of tyrosine kinase 1 product : docking protein 1 protein_id : NP_034200.3

name	Loxl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543127 CCDS:CCDS20266.1 GeneID:16950 MGI:1337004
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004720 - protein-lysine 6-oxidase activity [Evidence IEA]; GO:0005044 - scavenger receptor activity [Evidence IEA] codon_start : 1 note : lysyl oxidase-like 2 product : lysyl oxidase-like 3 protein_id : NP_038614.2

name	Htra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980991 CCDS:CCDS20267.1 GeneID:64704 MGI:1928676
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005758 - mitochondrial intermembrane space [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0008344 - adult locomotory behavior [Evidence IMP]; GO:0007628 - adult walking behavior [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0008629 - induction of apoptosis by intracellular signals [Evidence IMP]; GO:0007005 - mitochondrion organization and biogenesis [Evidence IMP]; GO:0048666 - neuron development [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0040014 - regulation of body size [Evidence IMP] codon_start : 1 exception : mismatches in translation note : serine protease OMI; motor neuron degeneration 2 product : protease, serine, 25 protein_id : NP_062726.2

name	Aup1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90403601 GeneID:11993 MGI:107789
definition	GO_function : GO:0008415 - acyltransferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : ancient ubiquitous protein protein_id : NP_031543.2

name	Dqx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19424112 CCDS:CCDS20268.1 GeneID:93838 MGI:2136388
definition	GO_function : GO:0016887 - ATPase activity [Evidence ISS] codon_start : 1 product : DEAQ RNA-dependent ATPase protein_id : NP_291084.1

name	Tlx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678367 CCDS:CCDS20269.1 GeneID:21909 MGI:1350935
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0050774 - negative regulation of dendrite morphogenesis [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : enteric neuron homeobox; homeo box 11-like 1 product : T-cell leukemia, homeobox 2 protein_id : NP_033418.1

name	Pcgf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574111 CCDS:CCDS20270.1 GeneID:69837 MGI:1917087
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : nervous system polycomb 1 product : polycomb group ring finger 1 protein_id : NP_932109.1

name	Lbx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754512 CCDS:CCDS20271.1 GeneID:16815 MGI:1342288
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : lady bird-like homeobox 2 homolog product : ladybird homeobox homolog 2 protein_id : NP_034822.1

name	A230058J24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486907 GeneID:243510 MGI:3045292
definition	codon_start : 1 product : hypothetical protein LOC243510 protein_id : NP_001074735.1

name	Mrpl53 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313040 CCDS:CCDS20272.1 GeneID:68499 MGI:1915749
definition	codon_start : 1 product : mitochondrial ribosomal protein L53 protein_id : NP_081020.1

name	Gcs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981106 CCDS:CCDS20273.1 GeneID:57377 MGI:1929872
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : glucosidase I product : glucosidase 1 protein_id : NP_065644.2

name	Wbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:145046224 GeneID:22377 MGI:104710
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : WW domain binding protein 1 isoform 3 protein_id : NP_001077392.1

name	Wbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:145046262 GeneID:22377 MGI:104710
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : WW domain binding protein 1 isoform 2 protein_id : NP_001077391.1

name	Wbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:145046242 GeneID:22377 MGI:104710
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : WW domain binding protein 1 isoform 1 protein_id : NP_058037.2

name	Znhit4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963729 GeneID:70020 MGI:1917270
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : high mobility group AT-hook 1-like 4 product : PAP-1 binding protein protein_id : NP_076036.1

name	Rtkn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677827 CCDS:CCDS20274.1 GeneID:20166 MGI:107371
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0017049 - GTP-Rho binding [Evidence IDA]; GO:0005095 - GTPase inhibitor activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0017048 - Rho GTPase binding [Evidence IDA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0045767 - regulation of anti-apoptosis [Evidence ISS]; GO:0007266 - Rho protein signal transduction [Evidence ISS] codon_start : 1 exception : mismatches in translation function : binds to p21rho and inhibits its GTPase activity note : isoform 1 is encoded by transcript variant 1 product : rhotekin isoform 1 protein_id : NP_033132.1

name	Rtkn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281638 CCDS:CCDS20274.1 GeneID:20166 MGI:107371
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0017049 - GTP-Rho binding [Evidence IDA]; GO:0005095 - GTPase inhibitor activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0017048 - Rho GTPase binding [Evidence IDA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0045767 - regulation of anti-apoptosis [Evidence ISS]; GO:0007266 - Rho protein signal transduction [Evidence ISS] codon_start : 1 exception : mismatches in translation note : isoform 3 is encoded by transcript variant 3 product : rhotekin isoform 3 protein_id : NP_598396.1

name	LOC100042991 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042991
definition	number : 1 pseudo : _no_value

name	EG622198 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622198
definition	number : 1 pseudo : _no_value

name	EG622318 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622318
definition	number : 2 pseudo : _no_value

name	EG622318 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622318
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:123487
definition	standard_name : 20.MMHAP6FLG2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130828
definition	standard_name : D6Mit281

name	(CDS detail)
type	STS
link
xref	UniSTS:122689
definition	standard_name : 02.MHAa92a2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:125079
definition	standard_name : MHAa21b5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124151
definition	standard_name : 35.MMHAP64FLD5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123874
definition	standard_name : 29.MMHAP75FRB11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:179398
definition	standard_name : AW146020

name	(CDS detail)
type	STS
link
xref	UniSTS:167469
definition	standard_name : RH126592

name	(CDS detail)
type	STS
link
xref	UniSTS:130754
definition	standard_name : D6Mit210

name	(CDS detail)
type	STS
link
xref	UniSTS:130687
definition	standard_name : D6Mit144

name	(CDS detail)
type	STS
link
xref	UniSTS:130938
definition	standard_name : D6Mit386

name	(CDS detail)
type	STS
link
xref	UniSTS:220607
definition	standard_name : RH138520

name	(CDS detail)
type	STS
link
xref	UniSTS:121920
definition	standard_name : D4MGH17

name	(CDS detail)
type	STS
link
xref	UniSTS:480302
definition	standard_name : Tacr1

name	(CDS detail)
type	STS
link
xref	UniSTS:207981
definition	standard_name : RH127103

name	(CDS detail)
type	STS
link
xref	UniSTS:130670
definition	standard_name : D6Mit129

name	(CDS detail)
type	STS
link
xref	UniSTS:130671
definition	standard_name : D6Mit129.1

name	(CDS detail)
type	STS
link
xref	UniSTS:179399
definition	standard_name : AI642394

name	(CDS detail)
type	STS
link
xref	UniSTS:235473
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130709
definition	standard_name : D6Mit164

name	(CDS detail)
type	STS
link
xref	UniSTS:260414
definition	standard_name : D6UmiJ20

name	(CDS detail)
type	STS
link
xref	UniSTS:130830
definition	standard_name : D6Mit283

name	(CDS detail)
type	STS
link
xref	UniSTS:142637
definition	standard_name : D6Umi10

name	(CDS detail)
type	STS
link
xref	UniSTS:163393
definition	standard_name : AB022316

name	(CDS detail)
type	STS
link
xref	UniSTS:260416
definition	standard_name : D6UmiJ23

name	(CDS detail)
type	STS
link
xref	UniSTS:144393
definition	standard_name : Sema4f

name	(CDS detail)
type	STS
link
xref	UniSTS:260409
definition	standard_name : D6UmiJ16

name	(CDS detail)
type	STS
link
xref	UniSTS:130730
definition	standard_name : D6Mit189

name	(CDS detail)
type	STS
link
xref	UniSTS:123225
definition	standard_name : 14.MMHAP63FRE8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:260411
definition	standard_name : D6UmiJ18

name	(CDS detail)
type	STS
link
xref	UniSTS:142638
definition	standard_name : D6Umi1a

name	(CDS detail)
type	STS
link
xref	UniSTS:260412
definition	standard_name : D6UmiJ19

name	(CDS detail)
type	STS
link
xref	UniSTS:185673
definition	standard_name : AW557123

name	(CDS detail)
type	STS
link
xref	UniSTS:231082
definition	standard_name : MARC_4349-4350:991938479:1

name	(CDS detail)
type	STS
link
xref	UniSTS:260419
definition	standard_name : D6UmiJ26

name	(CDS detail)
type	STS
link
xref	UniSTS:161004
definition	standard_name : RH124140

name	(CDS detail)
type	STS
link
xref	UniSTS:179401
definition	standard_name : AI481710

name	(CDS detail)
type	STS
link
xref	UniSTS:161788
definition	standard_name : RH124966

name	(CDS detail)
type	STS
link
xref	UniSTS:142639
definition	standard_name : D6Umi2

name	(CDS detail)
type	STS
link
xref	UniSTS:260417
definition	standard_name : D6UmiJ24

name	(CDS detail)
type	STS
link
xref	UniSTS:492892
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130972
definition	standard_name : D6Mit70

name	(CDS detail)
type	STS
link
xref	UniSTS:164327
definition	standard_name : AU024121

name	(CDS detail)
type	STS
link
xref	UniSTS:260421
definition	standard_name : D6UmiJ4

name	(CDS detail)
type	STS
link
xref	UniSTS:260422
definition	standard_name : D6UmiJ5

name	(CDS detail)
type	STS
link
xref	UniSTS:209909
definition	standard_name : RH135911

name	(CDS detail)
type	STS
link
xref	UniSTS:210015
definition	standard_name : RH136019

name	(CDS detail)
type	STS
link
xref	UniSTS:260420
definition	standard_name : D6UmiJ27

name	(CDS detail)
type	STS
link
xref	UniSTS:260423
definition	standard_name : D6UmiJ9

name	(CDS detail)
type	STS
link
xref	UniSTS:260406
definition	standard_name : D6UmiJ11

name	LOC232143 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255220 GeneID:232143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 15 Proteins product : similar to High mobility group box 2 pseudo : _no_value transcript_id : XR_034125.1

clone name	MSMg01-183K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336N11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-344E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525A19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-213O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344C20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-398O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174B19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-305J05.T7 (MSMg01no305_j05.b1)	MSMg01-305J05.TJ (MSMg01no305_j05.g1)
ACC	AG430497	AG430498
length	1,335	1,334
length of high quality (start - end)	426 (31 - 456)	382 (71 - 452)
definition	CHROMAT_FILE: MSMg01no305_j05.b1 PHD_FILE: MSMg01no305_j05.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:45:41 2005	CHROMAT_FILE: MSMg01no305_j05.g1 PHD_FILE: MSMg01no305_j05.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:45:41 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(81,925,883 - 81,926,293)	(82,092,867 - 82,093,224)
sequence	NGGGACGCACTGCGCCTATAGACTCCTATGGGAGAGGATCCGCGGAATTC TCTTCCTGAGGCAGTGGGTCGGGTTGAGGCAGGGTGCTATAATCTCAGCC CTTGAGAGGCCAAAGCAAGAGGATCATGGGTTCAAAGTCAGATTGGGCTA CACAGTAAGACTCTATCTTGACAGAACAAAGGGAAAAACAAAAAATGTGG TGGTTGAAGAAATTAATATAAGAATTATGAAGAAAGGCCTTATATCTCAA AGAATCAACCAAGCAGTGGAAAAGAGTAATCACCAACAGTTTGCAGAGAT GACCAGCAGGTGGCACCACCCACCCACAGGGATTTCTGCAGCTCCCCGGA GCGCCCTTGCTCACCTCCTAAGTGAAGCTTTAAATGAAGCATCCTGCCTC TGTTGTAACTAAGGGTTCTATTTCTGTTTTCCGGATGGAGAGCTACTTCT TGTTTTTTTTTCTCCCCCCCCCAAGGGNAAAGTTTTGTCATAAAAAAAAG GGGGAAACTTAACAAAATGTTCTCGTTTAAGAAAGTGTATCAACAATGTT CTAAGCCTACTGCCATCAGAAGCCACAGCTGCGCCCTGGAAAGTGGCAAG TCAGTCAGAGCCTCTCGCTCATCAGCTGAGCCCTTAGACCAGCATCCTCA TTGGTAGGAAGTCTTCTCTGAGATTCAGGGAATACTGGAAAGCTTCAGGA TGTGGAGTCTTTCAACGCAGCCCTGGGGATAGTAATACATTTTAAACTTA GCATGCAAAATCATGAGTTTTGTTATGGTATTCTGTAATGCATCTGTAAT ATATGACGTTATACTCTATTTTTATTCATCCTCTCTCACCGGGATCGTCC CCACTCTATCTTGCTCCTTCCTTCCTCCCTCTCACTCCCCTCTTTCTGGT TTATGCCCCACACCTTTCCATTACCTTTCGTCTGCTGGTTAGTTCTTGTC ACCTTAACACAGATGACATTTAATGTGGAAGGAGGGAACCTCATTTGAAA AATTGCCTGCTTCAAAATGACCATGCCTGTGGGGGCAATTTCTTAATTGT TGAATCTTGAATGGTGTTTAAGGGGAAAAGGTTCCAGCCCCTTGTGGGAA GGCCTTCCTGGGGCGTGGTTCCTGTTCTTTGCTAAAAAGACGAGTAATTT GATCTTGTCAAAAAAACCAGAACCTTTTCTCTTGGTTTCAGTTTCTCCCC TTTATAAAATCTTGAATTCTCCATCATGTTTCTACAAGGTCTTTTTCCTT TATTACTATATCCTTTTTATCTGGGTGGAAATATCATGGCCAAAATATTC GTGTACAAAGCATATTGACCCTCCCTTACTAAAAG	NNNTTAGAGAATGGAGCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXAAATAGCTCAGGAATCTGGAGACCGGAGCT AGTACAGAGGCCATGGAGTAGTGCTGATTACTGACTCAGTAGTCTCATCA GTCTGCTGGTTTTTAAATAAATAGAATCCAGGACCACCAACCAGGGATGA CACTACCCACAGAGAGCTGGGGGGCACCTATATCAACCATCAATCAAGAA AACATGCCACAAGTTTTCCCAAAACACAGCCATATGGGGCAAACTTAATT TAAGACAAAATTTAGCTTTTCTAAACTAAGTTTTCCTCTTCCACACTGAT TCTACCTTAGGTCGTGTTAGTATAAAACTATCCCCCACAGGGACCTTCAA ATATTATCATAAAACCTTAGGGATCCTGCTATGGCACATGACATAAGCCA GATATTTTTTATCTCCCCCCCCCCGCTTAGTGAGGTATATCCAAAAAAAA AGGGGGGGGTGCAGGAGAAAGAGAAAGAGAGAGAGAGAGAGAGGGAGAGA GAGAGAGAGAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA GGAAGGAAGGAAAGAAGACAGGATAATTGAGGGGAGGGGAGGGAGTAAGG GAAAGAGTATAGTTTTAATTTTTATTTTTTTTTTTATTATATTATTATTT ATTTATTTATATATGTTAAAATTTAATTTTTATTTTTATATATAATGTAT TATATATTTTTATTATTTTTTATTATGTAAATTATTTTTTTTTTATTATT TATAATTATTATTTATATTTATATTTATTTTATATTATTAATTTTTTTTT TATAATAAATAATTTTAATTGTTTTTTTATTTATTAATTTTTTATATAGT TAATTTATATAGGTTATTTTTTTTTAGTATTTATATTTTTATATTTTATT TTTTTTAATTTTTATAATTTTTATTATTGAATTTTTAATTATATGTATTT TTTGTATTTTTGTTTATATTTGTTTATATATTTGATTATATTATAATTTT TTTATATAAGTTTTGTTTTATTTTATTATAATTTTATTTTTAAATTGTTA TTATATAATTTGAGTTTTAATTAATTAATTTATTTTGATTTTAATATTTA TTTGTGTATTAATGTTATTATTGTGANATTTTTGATATATTTTTTTTTTA GATATTATTTTGATTATTAATTTTTTGGTATTTTAAGATATTATTTTATG TATTTTTTTGGTATGTATTTTTTTATATAGATTAGGTGAGATAATTTATT ATTATATTATAATATTATGAGTAATTATAGNTAA
quality values	Open. Hide. 0 3 6 6 6 6 6 6 6 6 6 8 8 8 8 8 10 10 8 8 8 8 12 9 8 8 11 8 8 8 21 19 30 33 33 36 42 42 42 42 50 54 50 50 42 42 47 47 68 68 68 68 68 68 68 68 50 50 43 43 43 50 51 48 42 37 30 30 30 37 42 41 37 37 41 42 57 57 57 68 57 50 46 46 46 38 33 27 30 28 32 30 30 37 32 43 43 43 43 57 50 50 50 50 50 46 44 52 52 52 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 57 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 59 57 44 43 35 35 35 43 44 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 52 52 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 47 41 39 37 37 37 41 48 50 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 25 25 12 15 12 9 9 9 12 12 24 25 34 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 53 53 59 59 59 59 59 37 59 31 36 28 26 26 19 19 19 15 17 8 6 6 6 9 9 20 39 39 23 17 11 9 9 16 29 3 0 3 23 21 18 15 12 15 12 14 14 14 14 13 13 11 15 17 17 14 13 10 10 10 12 11 11 11 11 12 22 23 36 41 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 48 48 48 57 57 68 68 68 68 68 57 57 57 57 57 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 57 57 57 57 57 57 59 59 59 57 57 57 57 57 68 68 68 59 59 59 68 68 68 68 57 57 54 54 54 57 59 57 57 48 48 48 57 59 59 59 59 59 43 43 30 30 23 30 28 28 20 32 32 46 41 42 41 47 39 39 41 41 39 39 41 47 41 41 37 37 37 37 37 37 39 39 41 37 37 34 34 23 28 32 31 24 14 14 27 28 43 47 43 39 32 35 43 43 37 37 34 37 36 37 37 37 37 37 26 30 30 30 30 30 43 44 44 37 37 44 44 36 36 35 36 36 59 47 47 23 15 9 9 9 19 21 39 37 37 30 30 30 37 21 19 10 10 10 15 15 14 15 19 19 28 34 34 39 37 37 43 37 37 30 30 28 34 23 24 15 21 22 26 26 36 39 37 43 33 21 21 18 19 32 37 37 48 48 47 46 46 41 25 22 8 8 8 15 9 31 40 40 39 36 32 37 37 34 27 13 10 10 15 14 11 16 12 12 16 23 34 39 36 26 30 31 31 33 33 40 40 40 37 37 26 29 19 22 12 16 16 17 19 24 31 34 24 22 24 28 24 25 34 28 30 23 22 12 11 14 9 9 9 22 17 25 22 31 31 25 14 7 6 6 6 7 13 15 14 8 8 8 8 11 11 12 10 11 20 19 16 23 18 18 16 19 24 20 20 17 10 10 10 8 11 11 26 24 28 24 18 18 11 11 11 16 11 11 13 13 19 13 13 8 8 8 9 9 13 16 14 17 16 17 14 14 10 16 13 10 10 10 10 21 11 11 10 10 10 8 8 8 8 8 8 9 13 11 13 13 8 9 9 9 12 10 11 12 12 8 8 10 10 9 11 8 8 8 8 8 8 12 9 10 8 9 9 9 8 8 11 16 16 15 15 15 10 10 10 9 9 8 8 8 8 10 22 20 15 8 8 8 9 12 12 20 20 16 17 15 16 10 8 8 7 8 8 12 15 11 9 9 11 11 11 15 16 9 9 9 9 11 11 11 13 17 17 18 12 10 9 13 6 8 6 6 6 11 9 11 11 11 16 12 11 11 10 10 10 10 10 10 10 12 6 6 6 8 8 9 8 8 10 10 10 8 8 6 6 6 6 6 8 8 11 8 10 6 6 6 6 6 8 8 7 6 8 8 10 10 7 6 6 6 8 8 9 9 9 9 10 9 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 13 11 12 10 8 6 6 8 8 8 10 17 11 8 7 8 10 10 8 6 11 10 11 11 11 11 11 16 10 15 18 19 15 15 10 13 12 19 11 11 11 12 8 8 8 13 13 10 17 19 17 10 8 10 8 8 8 8 9 8 8 8 6 6 6 10 15 10 8 8 10 8 8 8 12 8 10 10 10 10 13 10 11 11 13 11 11 11 17 16 10 13 8 15 8 10 10 10 10 10 13 13 11 8 8 8 8 6 6 8 8 10 8 8 8 10 7 7 8 6 8 8 8 8 6 6 8 8 6 6 8 8 8 8 8 9 8 8 6 6 11 8 11 8 8 6 8 8 10 8 7 8 6 6 8 8 8 6 6 10 10 8 8 8 10 12 11 11 12 9 9	Open. Hide. 0 0 0 3 6 6 6 7 6 6 6 6 6 6 8 8 8 6 6 6 7 9 11 15 10 7 9 9 16 15 22 21 21 10 10 10 21 21 29 17 17 28 36 36 36 36 37 37 37 47 50 50 50 48 57 57 57 57 57 68 68 54 57 44 43 32 33 31 37 37 29 36 36 43 39 42 47 47 50 53 50 50 50 41 41 39 37 37 29 28 15 15 11 11 11 22 19 30 28 29 28 29 30 35 36 38 43 43 43 43 48 42 34 42 43 42 47 47 47 47 40 43 57 57 57 57 43 54 43 43 43 43 68 68 68 50 50 50 50 50 50 50 50 50 57 57 68 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 51 50 50 50 50 50 50 57 57 57 57 57 59 68 59 44 43 33 33 43 44 44 59 59 59 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 59 59 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 68 68 59 59 57 57 57 57 54 54 54 57 57 57 57 57 57 59 59 59 59 59 57 57 57 57 57 57 59 59 68 68 68 57 57 68 68 68 57 57 54 54 54 59 59 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 57 59 54 59 59 59 59 54 54 54 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 47 47 41 41 39 41 59 25 24 11 12 11 11 8 8 8 8 8 10 22 34 41 59 59 59 59 59 59 59 57 48 48 48 50 50 57 57 57 57 57 57 57 59 57 57 57 57 48 48 57 57 48 53 59 59 59 59 59 33 27 12 8 6 6 6 6 7 9 11 6 6 6 10 9 9 16 18 17 18 9 9 9 12 9 11 9 17 18 23 27 46 43 34 34 25 21 11 8 8 8 8 8 10 15 17 21 13 20 16 13 12 11 11 12 12 22 17 19 17 17 14 33 33 50 50 50 50 53 53 57 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 54 54 54 54 54 54 54 54 54 54 54 54 54 54 54 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 54 54 54 54 54 54 59 59 59 57 54 54 48 48 48 48 54 48 48 50 48 57 57 57 50 50 48 48 48 48 48 43 43 43 48 43 43 48 41 40 40 41 41 25 25 12 12 12 25 16 16 13 8 8 6 6 8 8 10 10 13 8 8 6 6 11 10 13 15 10 8 8 8 12 10 10 8 12 10 10 8 8 8 8 8 9 10 12 15 9 9 10 10 10 9 9 9 8 8 8 8 8 8 9 9 11 13 11 11 8 8 8 8 8 9 10 10 12 17 10 8 8 8 13 19 31 16 13 10 10 13 10 8 8 8 8 8 8 8 8 7 6 10 8 13 12 11 10 10 11 11 11 11 18 12 8 8 8 8 8 8 13 10 11 8 10 8 11 8 8 8 8 9 9 10 9 8 10 6 6 8 8 8 17 10 10 10 15 10 8 8 10 10 8 9 9 13 12 10 10 9 9 10 8 9 10 10 13 13 13 9 9 10 9 9 9 14 9 9 9 10 10 12 10 14 15 14 10 9 8 8 7 9 12 12 19 10 13 9 10 10 10 9 10 9 10 10 7 6 8 8 11 8 10 7 7 8 8 9 10 10 8 8 6 6 8 7 7 11 11 12 8 12 10 10 8 8 8 10 8 8 10 9 8 8 8 8 11 10 10 8 8 12 10 10 11 12 16 11 11 11 10 10 12 16 10 9 10 11 8 8 6 6 8 8 11 12 14 9 10 10 10 10 9 12 12 12 12 10 10 13 17 12 8 8 10 10 10 10 9 12 10 10 10 9 10 10 8 8 8 10 10 9 10 11 13 9 9 9 10 8 11 9 7 7 8 8 8 12 12 6 6 8 8 6 6 6 6 10 8 8 8 8 6 6 10 10 10 7 6 10 8 13 10 12 13 18 17 9 9 9 10 9 9 9 9 10 10 10 11 10 8 8 9 13 12 10 10 8 8 8 12 10 10 8 8 8 10 10 10 9 8 11 11 8 8 8 13 8 8 8 8 10 9 8 10 10 8 10 11 10 8 9 9 9 9 9 10 11 8 8 8 8 8 13 13 10 8 8 13 8 8 6 6 8 8 10 12 11 11 13 19 19 13 12 11 11 10 11 12 12 11 11 9 9 9 8 10 7 9 10 9 6 8 8 8 6 6 6 6 8 10 13 8 8 8 8 8 8 10 10 10 10 10 12 23 19 23 16 16 16 8 8 8 8 8 10 15 15 16 15 9 9 8 8 7 7 8 8 10 8 8 6 6 8 6 8 8 6 6 8 8 10 10 10 10 9 9 9 8 8 3 0 3 9 15 12 10 8 6 6 8 6 9 9 9 13 18 19 17 17 11 8 8 6 6 8 8 8 12 10 8 6 6 8 8 12 16 11 8 8 6 6 8 8 6 6 8 8 11 11 8 8 8 8 10 10 8 8 9 9 10 11 11 11 11 9 9 8 8 8 10 10 10 8 6 6 7 8 8 15 21 18 20 9 9 9 9 9 12 8 8 7 8 10 10 8 8 8 10 10 8 8 6 6 6 6 8 13 10 8 6 6 8 8 6 6 6 6 6 11 10 8 7 6 8 8 8 8 8 8 12 8 7 7 8 8 10 12 12 8 8 6 6 6 6 8 8 8 8 8 8 8 6 6 3 0 3 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no305_j05.b1 MSMg01no305_j05.b1 CHROMAT_FILE:
MSMg01no305_j05.b1 PHD_FILE: MSMg01no305_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:41 2005
         (426 letters)



>mm_chr6_81925669_81926494
          Length = 826

 Score =  772 bits (399), Expect = 0.0
 Identities = 408/411 (99%)
 Strand = Plus / Plus

                                                                       
Query: 15  gaattctcttcctgaggcagtgggtcgggttgaggcagggtgctataatctcagcccttg 74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gaattctcttcctgaggcagtgggtcgggttgaggcagggtgctataatctcagcccttg 274

                                                                       
Query: 75  agaggccaaagcaagaggatcatgggttcaaagtcagattgggctacacagtaagactct 134
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 275 agaggccaaagcaagaggatcatgggttcaaagtcagcttgggctacacagtaagactct 334

                                                                       
Query: 135 atcttgacagaacaaagggaaaaacaaaaaatgtggtggttgaagaaattaatataagaa 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 atcttgacagaacaaagggaaaaacaaaaaatgtggtggttgaagaaattaatataagaa 394

                                                                       
Query: 195 ttatgaagaaaggccttatatctcaaagaatcaaccaagcagtggaaaagagtaatcacc 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttatgaagaaaggccttatatctcaaagaatcaaccaagcagtggaaaagagtaatcacc 454

                                                                       
Query: 255 aacagtttgcagagatgaccagcaggtggcaccacccacccacagggatttctgcagctc 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aacagtttgcagagatgaccagcaggtggcaccacccacccacagggatttctgcagctc 514

                                                                       
Query: 315 cccggagcgcccttgctcacctcctaagtgaagctttaaatgaagcatcctgcctctgtt 374
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 515 cccggagcgcccttgctcacctcctaagtgaagctttaaatgaagcatcctgcctctgct 574

                                                              
Query: 375 gtaactaagggttctatttctgttttccggatggagagctacttcttgttt 425
           | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ggaactaagggttctatttctgttttccggatggagagctacttcttgttt 625


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space:   340689
Effective search space used:   340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no305_j05.g1 MSMg01no305_j05.g1 CHROMAT_FILE:
MSMg01no305_j05.g1 PHD_FILE: MSMg01no305_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:41 2005
         (382 letters)



>mm_chr6_82092446_82093227
          Length = 782

 Score =  661 bits (342), Expect = 0.0
 Identities = 354/358 (98%)
 Strand = Plus / Minus

                                                                       
Query: 25  ggagctagtacagaggccatggagtagtgctgattactgactcagtagtctcatcagtct 84
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ggagctagtacagaggccatggagtagtgctgattactgactcagtagtctcatcagtct 720

                                                                       
Query: 85  gctggtttttaaataaatagaatccaggaccaccaaccagggatgacactacccacagag 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gctggtttttaaataaatagaatccaggaccaccaaccagggatgacactacccacagag 660

                                                                       
Query: 145 agctggggggcacctatatcaaccatcaatcaagaaaacatgccacaagttttcccaaaa 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 agctggggggcacctatatcaaccatcaatcaagaaaacatgccacaagttttcccaaaa 600

                                                                       
Query: 205 cacagccatatggggcaaacttaatttaagacaaaatttagcttttctaaactaagtttt 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cacagccatatggggcaaacttaatttaagacaaaatttagcttttctaaactaagtttt 540

                                                                       
Query: 265 cctcttccacactgattctaccttaggtcgtgttagtataaaactatcccccacagggac 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 539 cctcttccacactgattctaccttaggtcgtgttagtataaaactatcccccacaggaac 480

                                                                     
Query: 325 cttcaaatattatcataaaaccttagggatcctgctatggcacatgacataagccaga 382
           |||||||||| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cttcaaatatgagcacaaaaccttagggatcctgctatggcacatgacataagccaga 422


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space:   288329
Effective search space used:   288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information