Query= MSMg01no307_j02.b1 MSMg01no307_j02.b1 CHROMAT_FILE:
MSMg01no307_j02.b1 PHD_FILE: MSMg01no307_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:39 2005
(639 letters)
>mm_chr6_35548308_35549347
Length = 1040
Score = 1191 bits (616), Expect = 0.0
Identities = 631/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 5 gaattccagcaaatacctgcaaaggagcatgaagcccatttgcatgtgctacagcgctaa 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagcaaagacctgcaaaggagcatgaagcccatttgcatgtgctacagcgctaa 264
Query: 65 atgctaaacaaaggctcacttagtctcagccatgaggactttccctgcatactatggata 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 atgctaaacaaaggctcacttagtctcagccacgaggactttccctgcatactatggata 324
Query: 125 catgctggtagatgctggcgtgcttctgtgaagcgtgggcctccttgctcgcggggctgt 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgctggcagatgctggcgtgcttctgtgaagcgtgggcctccttgctcgcggggctgt 384
Query: 185 gtctttgtggaggcataacccaactcattgtgagaaaccagtgtgaagaggagaacctct 244
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtctttgtggagacataacccaactcattgtgagaaaccagtgtgaagaggagaacctct 444
Query: 245 gattagttattttcgtttagagggctgtgctttgtcttattgctttctgatttggcccac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gattagttattttcgtttagagggctgtgctttgtcttattgctttctgatttggcccac 504
Query: 305 aattattagataggcgatcgtctgagaaagtgctataaattactgctataaaggacttct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aattattagataggcgatcgtctgagaaagtgctataaattactgctataaaggacttct 564
Query: 365 ttacacacagctcctcttttattatgaagcaacacttccatagctatttctgcctgtatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttacacacagctcctcttttattatgaagcaacacttccatagctatttctgcctgtatt 624
Query: 425 tattctctgccacatttctagtaatttttcccccttattggcagggcttacataatcaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tattctctgccacatttctagtaatttttcccccttattggcagggcttacataatcaca 684
Query: 485 tactaacacctacaggaatgaatcacagctcatcttgcagatttatggcgtgcctacaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tactaacacctacaggaatgaatcacagctcatcttgcagatttatggcgtgcctacaga 744
Query: 545 aaaaaaaa-gtgcctcatgatgcaaactttaaggcttaaattatctctaaaagccccaca 603
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaaaaaaaagtgcctcatgatgcaaactttaaggcttaaattatctctaaaagccccaca 804
Query: 604 acaggcaataggcaagtaaacagcgtgatttagaga 639
||||||||||||||||||||||||||||||||||||
Sbjct: 805 acaggcaataggcaagtaaacagcgtgatttagaga 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space: 647870
Effective search space used: 647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_j02.g1 MSMg01no307_j02.g1 CHROMAT_FILE:
MSMg01no307_j02.g1 PHD_FILE: MSMg01no307_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:39 2005
(653 letters)
>mm_chr6_35697102_35698154
Length = 1053
Score = 1104 bits (571), Expect = 0.0
Identities = 634/655 (96%), Gaps = 4/655 (0%)
Strand = Plus / Minus
Query: 1 tttctcttcccccatctaaatgcagagaaataatggcttaaccctgaggttcttctccct 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 853 tttctcttcccccatctaaatgaagagaaataatggcttaaccctgaggttcttctccct 794
Query: 61 gggaagactgtattttgaataattagctgttaaataagctgtgaagaaaagaagaaaatg 120
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 793 gggaagactgtattttgaataattagctgat-aataagctgtgaagaaaagaagaaaatg 735
Query: 121 tggaaaatgtcttcctaaatttttgccttaaattattcacatgctgctaacgaggaca-t 179
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
Sbjct: 734 tggaaaatgtcttcctaaatttttgccttaaattattcacatgctcctaatgaggacagt 675
Query: 180 gccctggtatcctagaacagctctgaaagcatgccaagttctaaaaaggtgctataatca 239
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 674 gccctggtatcctagaacagctctgaaagcatgccaagttctaaagaggtgctataatta 615
Query: 240 aattcttgttttagtaatagtaagaactccatgtttttcttcttcctcaacaagtaaata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aattcttgttttagtaatagtaagaactccatgtttttcttcttcctcaacaagtaaata 555
Query: 300 gtgagctgaatgtagaatgaaaaaaatctgaaggtaaaatactgaacagctggctaacaa 359
||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 554 gtgagctgaatgtagaatg-aaaaactctaaaggtaaaatactgaacagctggctaacaa 496
Query: 360 ctgtcactacctccagaactgaaagttggagagtcacaggtgagttctgttattgggatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 495 ctgtcactacctccagaactgaaagttggagagtcacaggtgagttctgttatggggatc 436
Query: 420 agtattagtatggccatcctaaaagagagcctgggacccgtggggtgtggttgaacagcc 479
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
Sbjct: 435 agtattagtatggccatcctaaaagagagtctgggacctgtggggtgtggttgaacagtc 376
Query: 480 tgaagctaaacatggattttataggtgtataaagcatcattcaatggaattagacagcaa 539
||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 375 tgaagctaaacatggattttataggtgtataaagcatcattcagcgggattagacaacaa 316
Query: 540 agaaatatactacacccagtaactgagtccctcaacagttcagtaagagatttggctgtg 599
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 315 agaaatatactacacccagtaactgagaccctcaacagttcagtaagagatttggctgtg 256
Query: 600 tctc-aaacaagcttaagtcaaatttcttgaaaattctgatctgatttttgttga 653
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tctcaaaacaagcttaagtcaaatttcttgaaaattctgatctgatttttgttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
