Query= MSMg01no308_i24.b1 MSMg01no308_i24.b1 CHROMAT_FILE:
MSMg01no308_i24.b1 PHD_FILE: MSMg01no308_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:54 2005
(100 letters)
>mm_chr6_141474956_141475455
Length = 500
Score = 178 bits (92), Expect = 8e-50
Identities = 98/100 (98%)
Strand = Plus / Minus
Query: 1 cattttctttctaatgtgcttgtctggatgtgtcagtataagtcctagatggtgattcta 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 300 cattttctttctaatgtgcttgtctgcatgtgtcagtataagtcctagatggtgattcta 241
Query: 61 gactgacggttaaataaagttcctaacatggctttcagtc 100
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 240 gactgacggttaaataaagttcctaacacggctttcagtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 100
Length of database: 500
Length adjustment: 8
Effective length of query: 92
Effective length of database: 492
Effective search space: 45264
Effective search space used: 45264
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no308_i24.g1 MSMg01no308_i24.g1 CHROMAT_FILE:
MSMg01no308_i24.g1 PHD_FILE: MSMg01no308_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:55 2005
(292 letters)
>mm_chr16_87880012_87880703
Length = 692
Score = 528 bits (273), Expect = e-154
Identities = 288/295 (97%), Gaps = 4/295 (1%)
Strand = Plus / Minus
Query: 1 caagccagccaatactacgtagtgagattctgtctcaggaaagcacagggtgggaggagg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 641 caagccagccaatactacgtagtgagattctgtctcaagaaagcacagggtgggaggagg 582
Query: 61 aatgaagagagagggagagagaaagggaaagacataaatggag----agagagagagaga 116
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 581 aatgaagagagagggagagagaaagggaaagacagaaatggagagttagagagagagaga 522
Query: 117 gagagagacaaacagagacatagagagagatggtgttttaatagaactctctgagctgtt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gagagagacaaacagagacatagagagagatggtgttttaatagaactctctgagctgtt 462
Query: 177 gattcaaagagtataatggactccataatgtatcacctttagtaggtatttcaaaacatt 236
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gattcaaagagtataatgaactccataatgtatcacctttagtaggtatttcaaaacatt 402
Query: 237 ctgagctgggtttatgtttcttgtgtcctctactaagacgtttaagatacatatg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctgagctgggtttatgtttcttgtgtcctctactaagacgtttaagatacatatg 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
