CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAAGCCCATGGTTGGCTCAAGGGCTACCTAGGGCATTGTTGAAGGC
CAGGAAGCAAAGTTTAATTTTGCTTAGGTATTTGGCAAGTCATTGCTTGG
AGACACCTATAATAAAACAATACTGAGGGAAAGCACACAGATCCGTTTAC
CGACTAAAGCAAGGACATTGGAACATTTGTTATACAGGATGCCACGATTC
CAGGAGTCTAAGTTTCTATGAACTTTTTGCCTAGGGACTGTGTCCAGGCT
TTTAATCCTATCACACATGTCAGTACTGGAGTGGATGTAGCAATTTAACC
CTATATAATTTCTAACCTTACTTATCTTTTTAACATAAGCATTTGATGGG
CTTAAAGCTTCATGTCAACCATAAATGTGCTTCTCCATATATGTGTACAT
TTATGTTACACATATATACATATGTATTTATATAATATAATATATTGTTT
TATATGTATAACATAGTATGTTATACATTTTATATTATTATCTATGCATA
ACATAATATACATATATATATATATATATGTAAGTACATAGTGTCAAGTG
TAGAAACAATGTTAAAGGTTCTCTGTAAAATATCATCAAGCCAGTTTCTT
CACCCCCACCTACTCTCCACTCTTTCTATTTTATGAGCAGGATATGGTAT
GCATCCTGGTTCATACTTAACAACTTATTGTGN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCATGTCCATGACACATCTTTTGCTT
TGGGATAAGTTACATAAATGTCTGCGTCTGTTTTTGTTGTTGTTACTGTT
GTTGTTGTTCTTCTTCTTCTTTTGCTAGTTTTTTGTTTTGGTTTTAGTCT
AAAAGCAGGGAGGCATGACACATAATCAAAACACTAAACATACAGAACAA
GGAAAGTATTAAAAACTGCAAGAGAAAAAGGCCAAGTAAAATATAAAGGC
AGATCTATTAGAATTACATTCAACTTCTCAGTGGAGAAATTAAAAGCCAG
AAGAACCTGAACATATATTCTGAAGACTCTAAGTGACTATAGATGCCAGC
CCATACTACCATAGCCAACAACACTTTCAATTAACATAGATATTCCATGA
TAAAATCAAATGTAAACAATATTGTTTCACAAACTGTCCTACAGAAGATA
TTAGAAAGAAAACTTCAACTTAAGGAGGTTATCTACACTTATAAAAAATA
CAGAAAATAAATAATCTCACACCAGAAAAACTAAAAGAATGAAAGCACAT
GCAAACACATACACCACACACACACACACACAAAACATACACAGCCAATA
CAACCAACAACAAAGTAACAGGAGTTAGCAATCATTGGTCACTGATATCT
CTCAATATCAATGGACTCAGTTCN

Query= MSMg01no309_c13.b1 MSMg01no309_c13.b1 CHROMAT_FILE:
MSMg01no309_c13.b1 PHD_FILE: MSMg01no309_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:40 2005
         (689 letters)



>mm_chr6_36062739_36063827
          Length = 1089

 Score = 1226 bits (634), Expect = 0.0
 Identities = 679/712 (95%), Gaps = 28/712 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaagcccatggttggctcaagggctacctagggcattgttgaaggccaggaagc 64
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 177 gaattccaagcccatggttggctcaagggctacctagggcattggtgaaggccaggaagc 236

                                                                       
Query: 65  aaagtttaattttgcttaggtatttggcaagtcattgcttggagacacctataataaaac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 aaagtttaattttgcttaggtatttggcaagtcattgcttggagacacctataataaaac 296

                                                                       
Query: 125 aatactgagggaaagcacacagatccgtttaccgactaaagcaaggacattggaacattt 184
           |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 297 aatactgagggaaagcacacagattcgttcaccgactaaagcaaggacattggaacattt 356

                                                                       
Query: 185 gttatacaggatgccacgattccaggagtctaagtttctatgaactttttgcctagggac 244
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gttacacaggatgccacgattccaggagtctaagtttctatgaactttttgcctagggac 416

                                                                       
Query: 245 tgtgtccaggcttttaatcctatcacacatgtcagtactggagtggatgtagcaatttaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgtgtccaggcttttaatcctatcacacatgtcagtactggagtggatgtagcaatttaa 476

                                                                       
Query: 305 ccctatataatttctaaccttacttatctttttaacataagcatttgatgggcttaaagc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ccctatataatttctaaccttacttatctttttaacataagcatttgatgggcttaaagc 536

                                                                       
Query: 365 ttcatgtcaaccataaatgtgcttctccatatatgtgtacatttatgttacacatatata 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ttcatgtcaaccataaatgtgcttctccatatatgtgtacatttatgttacacatatata 596

                                                                       
Query: 425 catatgtatttatataatataatatattgttttatatgtataacatagtatgttatacat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 catatgtatttatataatataatatattgttttatatgtataacatagtatgttatacat 656

                                                                       
Query: 485 tttatattattatctatgcataacataatatacatata---------------------- 522
           ||||||||||||||||||||||||||||||||||||||                      
Sbjct: 657 tttatattattatctatgcataacataatatacatatacatacatacatatatatatata 716

                                                                       
Query: 523 ------tatatatatatatgtaagtacatagtgtcaagtgtagaaacaatgttaaaggtt 576
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tatatatatatatatatatgtaagtacatagtgtcaagtgtagaaacaatgttaaaggtt 776

                                                                       
Query: 577 ctctgtaaaatatcatcaagccagtttcttcacccccacctactctccactctttctatt 636
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 777 ctctgtaaaatatcatcaagccagttccttcacccccacctactctccactctttctatt 836

                                                               
Query: 637 ttatgagcaggatatggtatgcatcctggttcatacttaacaacttattgtg 688
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ttatgagcaggatatggtatgcatcctggttcatacttaacaacttattgtg 888


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space:   732641
Effective search space used:   732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)