CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCCTTATAAAGTGACTCAAAACTGAATCTAGATGAAGCAGAAAAT
ATAATGTGCTAAGTAACAGTAATAGAACAAACATGTACTGCTAAACATTT
TCAAAAAGTCTTGATATTTTTGAAGGTGCAGTCCAATAAACAGAAAATTA
TTTGCAAACCCAAATGGTCAGAAAAACAAACACGTGTTTAAAGAATGCAA
ATATTTCAAGTAGGTAGACTTCAAGTTTGAAGTTAAAAACATCTATCAAT
GTTGATAATGAGGCTGCCAGAAAAATTAATTTCATCTTCAAAATATTTTA
CTCTTGAAAACAAATTTATTATAATGCACCCCCACCCATCCTCTTATTCC
TTCTTTAGAAATTTTGTCCATTTCCCAAAAGAAAACTCAAATACATGGTT
CTAATTCCCAGTCAAAGTATGAACCTCAAGTGCTTCAATCCTTGCATCTC
TTCTTCAGGTTATCTGGATTGATCAGCTATCACTCAAGTTTCTTTGTGCA
TTCAGTTCTTTATACCATCCTTTGCCATATTTTTCCATCCAACATGTCTG
CTTCCTATAAGAACACAAGAAAAATCAAGCCCTGGAATTTCGCATGAAGA
CTCTGAACTTGGTGCTCTAGTACTTTTTCCTTCATTGAAGCTACCAAAAT
GAAAATAGATAATTTTCTGGATATAAACGTATGCCCATGATTTGA

TCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATCTCCATGAGAAATTCTATTTGC
ATAGGATGCCTGAACTTCAAATAAGTACGCAGAAACCAAACTGGAAAAGA
AAATTTTAAAAGATTAGTAATTAATAAGACACATTTATTACAATTTTTAT
AACTTAAAACTTTCTATATTTCTGTCTGTATCTGTGTGTATTACAAATTA
CCTCACAACTGTATTAGTTTAAATTTTTGAACAATAACAACCTCTGGCAA
CATATAACAGTCTAATAGAAAAGAAATGTGTTTGGTATTAATAAATAGTC
TCCATTTTTGATAATTTTTTCATTGCCCCCTTCTATCCCCCCATGCGGAG
AAACCCTGATACTGAAACTCGCATTCTCCCAAAAACAGAAGATTCCTCTG
AGCTGGGTGTGAAATGAAATGTTCCCTTTACCGGCTGTACTTTCCCATCT
TTGACCCTGTCTGGGAATTCGGGCCCCCTACATCATGGGAAAGGTTAACC
CCATAAACCTGGGGAAGGTTGAGTAGTTCTTGGCAGACCTACAAGTTCAG
ATTCCTGTTTTCCCACTAACCAACCACCCAGCATGTATATGGGACGCCTA
GAATGCCTCTCCATACAAATGAGACATTTCCACTGCTTTTACCTTTAATG
AATGAATTTCATTTACCCTGACCACTCCCTCTG

Query= MSMg01no309_d03.b1 MSMg01no309_d03.b1 CHROMAT_FILE:
MSMg01no309_d03.b1 PHD_FILE: MSMg01no309_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:43 2005
         (323 letters)



>mm_chr6_75616413_75617135
          Length = 723

 Score =  609 bits (315), Expect = e-179
 Identities = 318/319 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccttataaagtgactcaaaactgaatctagatgaagcagaaaatataatgtgc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccttataaagtgactcaaaactgaatctagatgaagcagaaaatataatgtgc 264

                                                                       
Query: 65  taagtaacagtaatagaacaaacatgtactgctaaacattttcaaaaagtcttgatattt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagtaacagtaatagaacaaacatgtactgctaaacattttcaaaaagtcttgatattt 324

                                                                       
Query: 125 ttgaaggtgcagtccaataaacagaaaattatttgcaaacccaaatggtcagaaaaacaa 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 ttgaaggtgcagtccaataaacagaaaattatttgcaaacccaaatggtcagaaaaccaa 384

                                                                       
Query: 185 acacgtgtttaaagaatgcaaatatttcaagtaggtagacttcaagtttgaagttaaaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acacgtgtttaaagaatgcaaatatttcaagtaggtagacttcaagtttgaagttaaaaa 444

                                                                       
Query: 245 catctatcaatgttgataatgaggctgccagaaaaattaatttcatcttcaaaatatttt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catctatcaatgttgataatgaggctgccagaaaaattaatttcatcttcaaaatatttt 504

                              
Query: 305 actcttgaaaacaaattta 323
           |||||||||||||||||||
Sbjct: 505 actcttgaaaacaaattta 523


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no309_d03.g1 MSMg01no309_d03.g1 CHROMAT_FILE:
MSMg01no309_d03.g1 PHD_FILE: MSMg01no309_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:43 2005
         (290 letters)



>mm_chr6_75762111_75762800
          Length = 690

 Score =  534 bits (276), Expect = e-156
 Identities = 285/288 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctccatgagaaattctatttgcataggatgcctgaacttcaaataagtacgcagaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 488 atctccatgagaaattctatttgcataggatgcctgaacttcaaataagtatgcagaaac 429

                                                                       
Query: 61  caaactggaaaagaaaattttaaaagattagtaattaataagacacatttattacaattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caaactggaaaagaaaattttaaaagattagtaattaataagacacatttattacaattt 369

                                                                       
Query: 121 ttataacttaaaactttctatatttctgtctgtatctgtgtgtattacaaattacctcac 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 368 ttataacttaaaactttctaaatttctgtctgtatctgtgtgtattacaaaatacctcac 309

                                                                       
Query: 181 aactgtattagtttaaatttttgaacaataacaacctctggcaacatataacagtctaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aactgtattagtttaaatttttgaacaataacaacctctggcaacatataacagtctaat 249

                                                           
Query: 241 agaaaagaaatgtgtttggtattaataaatagtctccatttttgataa 288
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agaaaagaaatgtgtttggtattaataaatagtctccatttttgataa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space:   191361
Effective search space used:   191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)