Query= MSMg01no309_g02.b1 MSMg01no309_g02.b1 CHROMAT_FILE:
MSMg01no309_g02.b1 PHD_FILE: MSMg01no309_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:57 2005
(213 letters)
>mm_chr6_72184439_72185051
Length = 613
Score = 397 bits (205), Expect = e-115
Identities = 211/213 (99%)
Strand = Plus / Minus
Query: 1 cgcctgacgtctctgacgcgcgcaaacgcggtttcgctctgggcacagtgggaccgggac 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cgcctgaggtctctgacgcgcgcaaacgcggtttcgctctgggcacagtgggaccgggac 354
Query: 61 tacccacgccaccgccgcctcccgcatctcagagcttggcacccggggatcccgaggcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tacccacgccaccgccgcctcccgcatctcagagcttggcacccggggatcccgaggcgc 294
Query: 121 actccttccgcgagcaggctctgcgtccccgcatcttgctgtgcgcccctcccgcgcgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 actccttccgcgagcaggctctgcgtccccgcatcttgctgtgcgcccctcccgcgcgtc 234
Query: 181 ccacacaatccgcgcctctcgtacccccagcgg 213
||||||||||||||||||||| |||||||||||
Sbjct: 233 ccacacaatccgcgcctctcgcacccccagcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no309_g02.g1 MSMg01no309_g02.g1 CHROMAT_FILE:
MSMg01no309_g02.g1 PHD_FILE: MSMg01no309_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:57 2005
(290 letters)
>mm_chr6_72024440_72025125
Length = 686
Score = 540 bits (279), Expect = e-158
Identities = 285/289 (98%), Gaps = 4/289 (1%)
Strand = Plus / Plus
Query: 2 caagggtttagaagttatgccccaggagtctaagacgaaaaacagacaaattcttttttt 61
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 202 caagggtttagaagttatgccccaggagtctaagacgaaaaaca----aattcttttttt 257
Query: 62 atgtatacaacatcccatagactgggccagaaaaaggactgccgttcccttggcttcagt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atgtatacaacatcccatagactgggccagaaaaaggactgccgttcccttggcttcagt 317
Query: 122 ctgtatccatggtcttgacatgctgtaattttagtcactgctcagaatgcttagggggct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctgtatccatggtcttgacatgctgtaattttagtcactgctcagaatgcttagggggct 377
Query: 182 gcattgagagtctgctaggagtaacatggccaagcactcatgacagctctgacataggga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcattgagagtctgctaggagtaacatggccaagcactcatgacagctctgacataggga 437
Query: 242 gcagatgaaaaagggacagtcagaacatgcacatactgcacccacgatg 290
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcagatgaaaaagggacagtcagaacatgcacatactgcacccacgatg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 686
Length adjustment: 9
Effective length of query: 281
Effective length of database: 677
Effective search space: 190237
Effective search space used: 190237
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
