Query= MSMg01no309_p14.b1 MSMg01no309_p14.b1 CHROMAT_FILE:
MSMg01no309_p14.b1 PHD_FILE: MSMg01no309_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:42 2005
(318 letters)
>mm_chr6_72672390_72673107
Length = 718
Score = 559 bits (289), Expect = e-164
Identities = 307/313 (98%), Gaps = 2/313 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaattggaagggagcgtatggtgtctggctctgacaagagcctgttacctcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gaattcttaattggaagggagcgtatggtgtctggctctgacaagagcctgttacctcca 645
Query: 65 aagagccactatacccaaacacaggcaatctgtctgt-gtaagtatggtttcagaggtgg 123
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 644 aagagccactatacccaaacacaggcaatctgtctgtggt-agtatggtttcagaggtgg 586
Query: 124 tgtacaaacgggtgaaatgtttacaaaggcttcttggaggatagtaatgtaagaaaggct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tgtacaaacgggtgaaatgtttacaaaggcttcttggaggatagtaatgtaagaaaggct 526
Query: 184 atcaaacacggctgtaggatcagaaaccagtctatgtgtttgtatttactgccatttgtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atcaaacacggctgtaggatcagaaaccagtctatgtgtttgtatttactgccatttgtc 466
Query: 244 tgggaatcaagattttttctctctctctgcaatcttaataaattcaaggataaattccta 303
|||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 465 tgggaatcaagattttttctctctctctgcaatcaaaagaaattcaagaataaattccta 406
Query: 304 agtgacttggctg 316
|||||||||||||
Sbjct: 405 agtgacttggctg 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_p14.g1 MSMg01no309_p14.g1 CHROMAT_FILE:
MSMg01no309_p14.g1 PHD_FILE: MSMg01no309_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:42 2005
(629 letters)
>mm_chr6_72504612_72505640
Length = 1029
Score = 1131 bits (585), Expect = 0.0
Identities = 618/629 (98%)
Strand = Plus / Plus
Query: 1 actatgtagccaaggatagccttgagtttctgatccccctgctttggcccctcgaatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 actatgtagccaaggatagccttgagtttctgatccccctgcttcggcccctcgaatgcc 260
Query: 61 ggtatggcaggtgtgcacgtctatgccagacatttagtgttgctttaagacagggtttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtatggcaggtgtgcacgtctatgccagacatttagtgttgctttaagacagggtttca 320
Query: 121 cgtagcccaggctagcctggagggtgaatgtccctgagcttctgtgccttgtgcccccac 180
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtaacccaggctagcctgtagggtgaatgtccctgagcttctgtgccttgtgcccccac 380
Query: 181 ctcccaagtgctggggggctaccactgtgtgtgctgtcataagtggcctgttcctttcct 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 ctcccaagtgctggggggctaccactgtgtgtgctgtcataagcggcctgttcctttcct 440
Query: 241 ttgggtgtattctgaggactcgaactctggcctcacacttgccatgctagggctttcccc 300
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ttgggtggattctgaggactcgaactctggcctcacacttgccatgcaagggctttcccc 500
Query: 301 agagagtatcacctgagctgtgggtcatccttagcttcttacacacggtgaggacaagca 360
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 501 agagagtatcacctgagctgtgggtcatccttagcttcttagagacggtgaggacaagca 560
Query: 361 aaggctacataaactctgaaccacccagaagtgtccccagatccctggagcatcgttgtc 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggctacataaactctggaccacccagaagtgtccccagatccctggagcatcgttgtc 620
Query: 421 atgatgcttgggacaatcatggcttctcttttcaggtctgcaaacagcatgtacacaccc 480
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgatgcttgggacaatcatagtttctcttttcaggtctgcaaacagcatgtacacaccc 680
Query: 481 atccctcagaggtaagcagtgtgcctcaccttggctctcctcccatctctacttccaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccctcagaggtaagcagtgtgcctcaccttggctctcctcccatctctacttccaagg 740
Query: 541 gctgctcctccctcctccctgttctcactatacccagacctcagtctccaggcctgctca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctgctcctccctcctccctgttctcactatacccagacctcagtctccaggcctgctca 800
Query: 601 agtctctgcgcttgagcccactcctcatg 629
|||||||||||||||||||||||||||||
Sbjct: 801 agtctctgcgcttgagcccactcctcatg 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
