Query= MSMg01no313_j13.b1 MSMg01no313_j13.b1 CHROMAT_FILE:
MSMg01no313_j13.b1 PHD_FILE: MSMg01no313_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:28 2005
(648 letters)
>mm_chr6_15681656_15682703
Length = 1048
Score = 1228 bits (635), Expect = 0.0
Identities = 646/653 (98%), Gaps = 7/653 (1%)
Strand = Plus / Plus
Query: 1 gattaagatgttgtctttcccttcccaaatttctctttctaatcctcctaccccccagcc 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 198 gattaagatgttgtctttcccttcccaaatt--tctttctaatcctcctaccccccagcc 255
Query: 61 ctttccccactctcgcctcttttaaacatggacagtgtactatccttctctccctctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ctttccccactctcgcctcttttaaacatggacagtgtactatccttctctccctctctg 315
Query: 121 atttactaccacgtattttaaaccaccaatgcattttatacctttcttaatgttcatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atttactaccacgtattttaaaccaccaatgcattttatacctttcttaatgttcatact 375
Query: 181 caatcacgtacttctatttttgtaaatatttccgttttgcttatgcacattttcctttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 caatcacgtacttctatttttgtaaatatttccgttttgcttatgcacattttcctttgg 435
Query: 241 ctccctcaatagataagctggtccatttatagttgctttgtttattttttgtttttg--- 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctccctcaatagataagctggtccatttatagttgctttgtttattttttgtttttgttt 495
Query: 298 --ttttttttttttcattttgaatccaatcagaccttcctcttgaaggaattcatttcag 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttttttttttttttcattttgaatccaatcagaccttcctcttgaaggaattcatttcag 555
Query: 356 agcttgctgaaaagtctcatcataacgcaggtaacaatgacttaactgaattgatttacg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agcttgctgaaaagtctcatcataacgcaggtaacaatgacttaactgaattgatttacg 615
Query: 416 cattcaattcaatccacaaacacataatttatctgtgattatatgcttttttctatttat 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cattcaattcaatccacaaacacataatttatctgtgattatatgcttttttctatttat 675
Query: 476 aaaatcatgaacgtttatctatatgcctgtttgtctaccagtgtgtgttaccatggttat 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaaatcatgaacgtttatctatatgcctgtttgtctaccagtgtgtgttaccatggttat 735
Query: 536 ttatatgatcttacatgctttttagaaaaggagattgtaatccgctgggaaggaaagaca 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ttatatgatcttacatgctttttagaaaaggagattgtaatccgctgggaaggaaagaca 795
Query: 596 aagaaagttagatttgcgttgttctgtaaaggtcattaggcttccgggttgtt 648
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 aagaaagttagatttgcgttgttctgtaaaggtcattaggcttccgggttgtt 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_j13.g1 MSMg01no313_j13.g1 CHROMAT_FILE:
MSMg01no313_j13.g1 PHD_FILE: MSMg01no313_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:28 2005
(344 letters)
>mm_chr6_15845101_15845844
Length = 744
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Minus
Query: 1 agaaagtgatatgtgttccactcctagtgacagcatataatgaataaataagcaatcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agaaagtgatatgtgttccactcctagtgacagcatataatgaataaataagcaatcgtc 253
Query: 61 attgttgtgattgttaccaaccaaattctaacttggtttcaatatggagtcactaaagga 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attgttgtgaatgttaccaaccaaattctaacttggtttcaatatggagtcactaaagga 193
Query: 121 atcccatgaaagaggaggcaggaagagtgcaagagccagatgggatggaagacaccaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atcccatgaaagaggaggcaggaagagtgcaagagccagatgggatggaagacaccaggg 133
Query: 181 aaacaaggccctctaagttaactgagcaaggctcacatgaactcagagaaggtgaagcag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 132 gaacaaggccctctaagttaactgagcaaggctcacatgaactcagagaaggtaaagcag 73
Query: 241 agagaacatatatgtatgtgtatgtagactctcttggggctcttttccttctgttggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agagaacatatatgtatgtgtatgtagactctcttggggctcttttccttctgttggttt 13
Query: 301 cccttttctaac 312
||||| ||||||
Sbjct: 12 cccttctctaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
