Query= MSMg01no315_b17.b1 MSMg01no315_b17.b1 CHROMAT_FILE:
MSMg01no315_b17.b1 PHD_FILE: MSMg01no315_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:29 2005
(206 letters)
>mm_chr6_143785034_143785638
Length = 605
Score = 362 bits (187), Expect = e-104
Identities = 199/205 (97%), Gaps = 5/205 (2%)
Strand = Plus / Plus
Query: 4 ggaattccatcctcttc--gctgtgctggccaagaaggggaagctaatatctgaccgtgg 61
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatcctc---aggatgtgctggccaagaaggggaagctaatatctgaccgtgg 260
Query: 62 ggtgcttagagctaagtctttctgaggagtgaggtggtgaagagcagatgtgatcactgg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgcttagagctaagtctttctgaggagtgaggtggtgaagagcagatgtgatcactgg 320
Query: 122 tggaaactcgaatgggattctggcagttctatagggagagggtgtgtgtgtgtgtgtgtg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaaactcgaatgggattctggcagttctatagggagagggtgtgtgtgtgtgtgtgtg 380
Query: 182 tgtgtgtgtgtgtgtgtgtgtgtgt 206
|||||||||||||||||||||||||
Sbjct: 381 tgtgtgtgtgtgtgtgtgtgtgtgt 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 605
Length adjustment: 8
Effective length of query: 198
Effective length of database: 597
Effective search space: 118206
Effective search space used: 118206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no315_b17.g1 MSMg01no315_b17.g1 CHROMAT_FILE:
MSMg01no315_b17.g1 PHD_FILE: MSMg01no315_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:29 2005
(629 letters)
>mm_chr6_143858160_143859188
Length = 1029
Score = 1208 bits (625), Expect = 0.0
Identities = 628/629 (99%)
Strand = Plus / Minus
Query: 1 aaaagtatgtctttgaataatggagtagttccccagtagaaccccagttccctttgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 aaaagtatgtctttgaataatggagtagttccccagtagaaccccagttccctttgaaaa 770
Query: 61 aatggtgagaatgaatgcttgtgtggagtgagggacggatgtgtgcttttaatctttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aatggtgagaatgaatgcttgtgtggagtgagggacggatgtgtgcttttaatctttctt 710
Query: 121 ttccattttcttttttacagtgtcgagtatgtgacatctctaaccttcaaacacagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ttccattttcttttttacagtgtcgagtatgtgacatctctaaccttcaaacacagaaca 650
Query: 181 atgttgagggttttgccatttcaactttaagtataaatcctgtaattttctttgaaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 atgttgagggttttgccatttcaactttaagtataaatcctgtaattttctttgaaagtt 590
Query: 241 gcaaatatgcccataatgatcagtaatcattgaatcacctcttaggcataattgatagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gcaaatatgcccataatgatcagtaatcattgaatcacctcttaggcataattgatagag 530
Query: 301 tcatttaaacatctaaacatcaactgtgatagacagacagacagacacacagctttaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 529 tcatttaaacatctaaacatcaactgtgatagacagacagacagacagacagctttaaaa 470
Query: 361 tataataataaatcttttatgggtcaaaactaaattttaagtcattgaggtactttttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tataataataaatcttttatgggtcaaaactaaattttaagtcattgaggtactttttaa 410
Query: 421 acaatttggtatttgtatacagatgtttagatgccctgagttacctctattaattggtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acaatttggtatttgtatacagatgtttagatgccctgagttacctctattaattggtga 350
Query: 481 aatgtcgtttttattctatactaaagccaggaacttgaatcattactacatgtctctagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aatgtcgtttttattctatactaaagccaggaacttgaatcattactacatgtctctagt 290
Query: 541 aataacaaccagtgcgattcttctcaggaacacgtaagaaatgctatggaagatcacaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aataacaaccagtgcgattcttctcaggaacacgtaagaaatgctatggaagatcacaga 230
Query: 601 ctataatacagttgtggggctagactgaa 629
|||||||||||||||||||||||||||||
Sbjct: 229 ctataatacagttgtggggctagactgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
