Query= MSMg01no315_k01.b1 MSMg01no315_k01.b1 CHROMAT_FILE:
MSMg01no315_k01.b1 PHD_FILE: MSMg01no315_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:10 2005
(196 letters)
>mm_chr6_63613620_63614213
Length = 594
Score = 352 bits (182), Expect = e-102
Identities = 188/190 (98%), Gaps = 2/190 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaccataagagacatcttttatgaatatgaaagtctaaattcaaataactagta 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggaattcaccataagaga-atcttttatgaatatgaaagtctaaattcaaataactagta 333
Query: 64 ctcacagaaaaatgccaggcatcacttcaaatgcgggtacctctagttttgcatgttgga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ctcacagaaaaatgccaggcatcacttcaaatgcgggtacctctagttttgcatgttgga 273
Query: 124 atcaagtagttcctgggagcctcccagtcagccactctagtggaaaaaaagtgaacttct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atcaagtagttcctgggagcctcccagtcagccactctagtggaaaaaaagtgaacttct 213
Query: 184 gagttcaagg 193
|| |||||||
Sbjct: 212 ga-ttcaagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 594
Length adjustment: 8
Effective length of query: 188
Effective length of database: 586
Effective search space: 110168
Effective search space used: 110168
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no315_k01.g1 MSMg01no315_k01.g1 CHROMAT_FILE:
MSMg01no315_k01.g1 PHD_FILE: MSMg01no315_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:10 2005
(332 letters)
>mm_chr6_63456542_63457273
Length = 732
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Plus
Query: 1 tacaggctaatctgtagacggcagagagagacaatatattggttacaaaacagggttaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tacaggctaatctgtagacggcagagagagacaatatattggttacaaaacatggttaat 260
Query: 61 tttatattctttgataatcaatgaacatttgattgtagttctcatgatataactatgatc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatattctttgataatcaatgaccatttgattgtagttctcatgatataactatgatc 320
Query: 121 ttagttcatacatctaagtgaaaaatagagaaatatttagttctgataaaaataatttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagttcatacatctaagtgaaaaatagagaaatatttagttctgataaaaataatttag 380
Query: 181 aattttctttcagccaaaaattgtttccttacttctgagtatattttataaattattact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattttctttcagccaaaaattgtttccttacttctgagtatattttataaattattact 440
Query: 241 tttgtataataaattattcaatagtaaccaaggacaaattatttttcacattttaacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgtataataaattattcaatagtaaccaaggacaaattatttttcacattttaacaga 500
Query: 301 ggatctttccttgctttatttttg 324
||||||||||||||||||||||||
Sbjct: 501 ggatctttccttgctttatttttg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
