Query= MSMg01no315_m09.b1 MSMg01no315_m09.b1 CHROMAT_FILE:
MSMg01no315_m09.b1 PHD_FILE: MSMg01no315_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:21 2005
(669 letters)
>mm_chr6_101222276_101223343
Length = 1068
Score = 1031 bits (533), Expect = 0.0
Identities = 548/555 (98%), Gaps = 5/555 (0%)
Strand = Plus / Minus
Query: 117 tcacgtgtgtacatgcatgccagtggaagtcagagcacatgggtgctgtccttcaggaag 176
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 tcacgtgtgtgcatgcatgccagtggaagtcagagcacatgggtgctgtccttcaggaag 1009
Query: 177 cctctaccttgtgtttgaagtcgtcgtcggcactcactaggatctgaaactcactgactc 236
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1008 cctctaccttgtgtttgaagtcgtcgtcgtcactcactaggatctgaaactcactgactc 949
Query: 237 ggctgctgcaccccagggatctgcccgtctctgcctccccagcactgaacatacaagcgc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 ggctgctgcaccccagggatctgcccgtctctgcctccccagcactgaacatacaagcgc 889
Query: 297 acccattacacattaccggcgaaccgctgccaccccagccccttcactgcagcttttcga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 acccattacacattaccggcgaaccgctgccaccccagccccttcactgcagcttttcga 829
Query: 357 gtaatagaagaa--cccacacttctctctggctgttggccccgggttgatttgtggtgga 414
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gtaatagaagaagt---acacttctctctggctgttggccccgggttgatttgtggtgga 772
Query: 415 aagaagattctttcagttatgggtcagaagaggaaactcgggctttgcatcctggtattc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aagaagattctttcagttatgggtcagaagaggaaactcgggctttgcatcctggtattc 712
Query: 475 cttgggtggtagacttctgagatctggacataattctttaagggacaacacttgagggac 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cttgggtggtagacttctgagatctggacataattctttaagggacaacacttgagggac 652
Query: 535 ctgttgctttgccgtcaggttggctgtagacatggcctcctccctgtataatatagctca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ctgttgctttgccgtcaggttggctgtagacatggcctcctccctgtataatatagctca 592
Query: 595 ccttgtttccttatctgttttcctggcccttgtagtctaaaatgtacataaaccacccca 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ccttgtttccttatctgttttcctggcccttgtagtctaaaatgtacataaaccacccca 532
Query: 655 gctctttcccaaccc 669
|||||||||||||||
Sbjct: 531 gctctttcccaaccc 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1068
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1058
Effective search space: 697222
Effective search space used: 697222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_m09.g1 MSMg01no315_m09.g1 CHROMAT_FILE:
MSMg01no315_m09.g1 PHD_FILE: MSMg01no315_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:21 2005
(338 letters)
>mm_chr6_101159559_101160296
Length = 738
Score = 629 bits (325), Expect = 0.0
Identities = 334/337 (99%)
Strand = Plus / Plus
Query: 1 aggacatgtctccatagtagactgttctttctatgagcttggaattgagtcatggcccat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggacatgtctccatagtagactgttctttctatgagcttggaattgagtcatggcccac 260
Query: 61 tcgcttgctcatctgtgaggcttgaagaagccaggtaacagtgccgggtggggcaggcat 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 tcgcttgctcatctgtgaggcttgaagaagccaggtaacagtgcggggtggggcaggcat 320
Query: 121 tagctgggtgacttgggcattaaacagaagctggctcgggagtttaaaacagctctgctt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagctgggtgacttgggcattaaacagaagctggctcgggagtttaaaacagctctgctc 380
Query: 181 ggaagataaacaagaagcactaaagacactcacttggggaaaaagctgccaactgaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagataaacaagaagcactaaagacactcacttggggaaaaagctgccaactgaggct 440
Query: 241 tcataattcacttctacctatgaggttcaagtaccatcaagtctgaaattactcgcaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcataattcacttctacctatgaggttcaagtaccatcaagtctgaaattactcgcaaag 500
Query: 301 cttctaccctggatttactttctatataaaacaacac 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttctaccctggatttactttctatataaaacaacac 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
