Query= MSMg01no315_o08.b1 MSMg01no315_o08.b1 CHROMAT_FILE:
MSMg01no315_o08.b1 PHD_FILE: MSMg01no315_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:30 2005
(349 letters)
>mm_chr6_51438901_51439649
Length = 749
Score = 634 bits (328), Expect = 0.0
Identities = 343/350 (98%), Gaps = 4/350 (1%)
Strand = Plus / Minus
Query: 1 tggtgcacgcctttaatcctagcacttgggagtcagaggcaggcagatttctgagtgggc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 603 tggtgcacgcctttaatcctagcacttgggagtcagagacaggcagatttctgagtgggc 544
Query: 61 tacccagagaaactctgtctagaaaaacc----agagagagagagagagagagagagaga 116
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 543 tacccagagaaactctgtctagaaaaaccagagagagagagagagagagagagagagaga 484
Query: 117 gagagagagagagagagagagagagttagttagttcctggtcttctgtctggtgttacca 176
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 483 gagagagagagagagagagagagagctagttagttcctggtcttctgtctggtgttacca 424
Query: 177 tccactcaccccacgctatcatctcaagttaaacggtctcctttgctaagaaagcatttt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tccactcaccccacgctatcatctcaagttaaacggtctcctttgctaagaaagcatttt 364
Query: 237 aactccatgaagtttgttttctgtatgggatggttctgatgctttcattgggaatctgcg 296
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aactccatgacgtttgttttctgtatgggatggttctgatgctttcattgggaatctgcg 304
Query: 297 tgtagatgatgacggtcctattccccagttagctctttttcttttttttt 346
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgtagatgatgacggtcctattccccagttagctctttttcttttttttt 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_o08.g1 MSMg01no315_o08.g1 CHROMAT_FILE:
MSMg01no315_o08.g1 PHD_FILE: MSMg01no315_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:30 2005
(286 letters)
>mm_chr6_51332228_51332912
Length = 685
Score = 449 bits (232), Expect = e-130
Identities = 267/286 (93%), Gaps = 15/286 (5%)
Strand = Plus / Plus
Query: 1 actgtgcagtttacctgcactgggtcgagatcccgcactttgcctt--cccgtgatctga 58
|||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||
Sbjct: 201 actgtgcagtttacctgcactgggtcgagaccccccactttgccttag---gtgatctga 257
Query: 59 aagcgacttcctgttcagggagtagctgtgtggctccgtctgaaaagttttagatgtaat 118
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 258 aagtgacttcctgttcagggagtagctgtgtgactccgtctgaaaagttttagatgtaat 317
Query: 119 gtcaccagcggtgacatatggagtggccaagcaggaaagaaagaaggaaagctatggctg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtcaccagcggtgacatatggagtggccaagcaggaaagaaagaaggaaagctatggctg 377
Query: 179 cacacggaatgtgtgcacagtgagaacagtgacaggcatagcagaagccgccacggcaga 238
||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 378 cacacggaatgtgtgcacagtga---------caggcatagcagaagccgccacggcaga 428
Query: 239 ctcttgccaaagactctaggcccggggctgcaccgaaagtcttttg 284
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 429 ctcttgccaaagactctaggcccggg-ctgcaccgaaagtcttttg 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
