CGGCGCTATACGACTCCTATATTCAGAGGATCCGCGGAATTCCTGATCTT
TACAAACTTTTATCATGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCT
GCATCTAACGAGATGATCATGTGGTTTTTGGCCTTTGAGTTTATTTACAT
AATGGATTACATTGATGGATTTCGTATATTAAAGCATCCCTGCATCCCTG
GAACAAAACCTACTTGGTCAGGATGGATGACGTTATGATATGATCTGGTT
TGATGTGAGCTACATGGTTCGAGGATTTTGCAACTTTTTTCTAGGAGGAT
TTGGCCGAATTTTTTCACTAAGAAGAAATTTTTTTGGGAAAACCTTCAAA
TTTTGGCGGCCCCCTTGGGGGGGGGAAAAAAACCCAAAAATATTGTGTGG
TTTAAAAAATGGGGAGTGTGGAAAAAACTCCTTTCTTCTCTTTTTTTTTG
GTCAAAAAACCTTCTGGGGGAAAGGCGTTTTTTCACCCCTTCTTTAATGG
CGGGTTTTTTATTAAGGGCTGGGAATTTACCCCCTTTTGCCCCGTGTTTT
TTTTGCGGGATAAAAAAAATTTTTTCCCCCCTTTTTTTTTTTTTTAAGAT
GCGCGTTACGCACGTTTTGGGTTTATTTTTTTATTTACCACAATTGCGGG
CTCTTTAATTTTTTTCGGTTTAAATTTTTTTCCCCCCCCTGTGTGTACTT
CCCTTATTATTTGTTTGANCTTCCCAACCAATCCTTATTTTCCATTTTTA
TGCTTTCGTTTTTNTCCTCATATATNATTCTTTTTTCTTAAAACTTTTGG
TCTCTATTCACATTTCACTTCCG

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCCCAATCACATGACTGGAAGACC
TTCTTTGTAGTCATTGACTTCAAAACCCAAGACTATTCCATGAGGATTAA
ATTTTTGTACTTTGAGAATGGTGAATGCTATTTCCCAAAGCCTAAAGATC
ACTATGTACACACTTTTTATTATTTATTATTAAGTAGAGTATATCATAAA
CAGAAATGTGCTGGTAATATGAAATCATGTTTTGGCAATGTACAGATGCC
AAAATTAAACAATTAAAATGTATACAATAAATGGTAGCAATTTAAACTAA
ATATGGAAAGAAATAGTGCACATTTACTGAGAATTAAACCAATAGATTTA
TAAACCAATACTTCAATATCTTCAGATGCTACACTACTGTAATATTACTA
TAAATTTGCTCCTGAAATTAATGGTGTACATTTTTTTCAACAAGTTTGTA
TTTATAGTAATGAAAAGAGAAAAAAATGCAATAGTATTTGAGTAAGTGAT
GGGGCAAAAACTCAGGGATACTCATTATTTTAAGGGTGGTTAGTTACTGT
GATTCAGGAAGAAAGTGCTTAGAATTGGATAAGTTGTATTTATTTTGATT
ACAGGTGTGACATATTTCCTATATGTACCTTTATTTGTTTCCCAATAACG
AGTAAAAAATAGGTCTCTTTGTTTCGACTGCTCATTGCAGACACCAGACG

Query= MSMg01no316_a10.g1 MSMg01no316_a10.g1 CHROMAT_FILE:
MSMg01no316_a10.g1 PHD_FILE: MSMg01no316_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:40 2005
         (664 letters)



>mm_chr6_20444545_20445607
          Length = 1063

 Score = 1245 bits (644), Expect = 0.0
 Identities = 659/664 (99%), Gaps = 1/664 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccccaatcacatgactggaagaccttctttgtagtcattgacttcaaaacccaagactat 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccaatcacattactggaagaccttctttgtagtcattgacttcaaaacccaagactat 260

                                                                       
Query: 61  tccatgaggattaaatttttgtactttgagaatggtgaatgctatttcccaaagcctaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccatgaggattaaatttttgtactttgagaatggtgaatgctatttcccaaagcctaaa 320

                                                                       
Query: 121 gatcactatgtacacactttttattatttattattaagtagagtatatcataaacagaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatcactatgtacacactttttattatttattattaagtagagtatatcataaacagaaa 380

                                                                       
Query: 181 tgtgctggtaatatgaaatcatgttttggcaatgtacagatgccaaaattaaacaattaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgctggtaatatgaaatcatgttttggcaatgtacagatgccaaaattaaacaattaa 440

                                                                       
Query: 241 aatgtatacaataaatggtagcaatttaaactaaatatggaaagaaatagtgcacattta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgtatacaataaatggtagcaatttaaactaaatatggaaagaaatagtgcacattta 500

                                                                       
Query: 301 ctgagaattaaaccaatagatttataaaccaatacttcaatatcttcagatgctacacta 360
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ctgagaattaaaccaatagatttataaaccaatacttcaatattttcagatgctacacta 560

                                                                       
Query: 361 ctgtaatattactataaatttgctcctgaaattaatggtgtacatttttttcaacaagtt 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 ctgtaatattactataaatttgctcctgaaattaatggtgtacatttttttccacaagtt 620

                                                                       
Query: 421 tgtatttatagtaatgaaaagagaaaaaaatgcaatagtatttgagtaagtgatggggca 480
           ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 621 tgtatttatagtaatgaaaagagaaaaaa-tgcaatagtatttgagtaagtaatggggca 679

                                                                       
Query: 481 aaaactcagggatactcattattttaagggtggttagttactgtgattcaggaagaaagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaaactcagggatactcattattttaagggtggttagttactgtgattcaggaagaaagt 739

                                                                       
Query: 541 gcttagaattggataagttgtatttattttgattacaggtgtgacatatttcctatatgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcttagaattggataagttgtatttattttgattacaggtgtgacatatttcctatatgt 799

                                                                       
Query: 601 acctttatttgtttcccaataacgagtaaaaaataggtctctttgtttcgactgctcatt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 acctttatttgtttcccaataacgagtaaaaaataggtctctttgtttcgactgctcatt 859

               
Query: 661 gcag 664
           ||||
Sbjct: 860 gcag 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1063
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1053
Effective search space:   688662
Effective search space used:   688662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)