Query= MSMg01no317_a13.b1 MSMg01no317_a13.b1 CHROMAT_FILE:
MSMg01no317_a13.b1 PHD_FILE: MSMg01no317_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:57 2005
(347 letters)
>mm_chr6_101552568_101553314
Length = 747
Score = 656 bits (339), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Plus
Query: 1 tgaatatgtgagtcatccacactgagccattgaggtgatcattgagctcacgaagaaatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgaatatgtgagtcatccacactgagccattgaggtgatcattgagctcaggaagaaatg 260
Query: 61 agctcatggtgggggtgggggcggggacctggaccataagtaaccatatgccctcatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctcatggtgggggtgggggcggggacctggaccataagtaaccatatgccctcatgca 320
Query: 121 agcttggatgacattcaagcctgaagtgactgttctcacaacctgcagcagaaacaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcttggatgacattcaagcctgaagtgactgttctcacaacctgcagcagaaacaaatg 380
Query: 181 tttccttccgggaccagttgaatgactctcagattttcattctaactctttaagactgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttccttccgggaccagttgaatgactctcagattttcattctaactctttaagactgtt 440
Query: 241 tcttccactttacttcaaagcctgtgacttccctttcaaaacatttgcaaaatgttaaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tcttccactttacttcaaagcctgtgacttccctttcaaaacatttgcaaaatggtaaaa 500
Query: 301 atcctacctccaaagagcacattgaagtggagctgcaaacataatcg 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcctacctccaaagagcacattgaagtggagctgcaaacataatcg 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_a13.g1 MSMg01no317_a13.g1 CHROMAT_FILE:
MSMg01no317_a13.g1 PHD_FILE: MSMg01no317_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:57 2005
(653 letters)
>mm_chr6_101722229_101723275
Length = 1047
Score = 1133 bits (586), Expect = 0.0
Identities = 641/680 (94%), Gaps = 34/680 (5%)
Strand = Plus / Minus
Query: 1 aaggacagtctggtctacagagtgagttccaggacaacgagggctatacagagaaaccct 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 871 aaggacagtctggtctacagagtgagttccaggacaaccagggctatacagagaaaccct 812
Query: 61 gtctcaaaaacaaaaca----------------------------aaacaaacaaacaaa 92
||||||||||||||||| |||||||||||||||
Sbjct: 811 gtctcaaaaacaaaacaaaacaaacaaacaaacaaaaacccaaacaaacaaacaaacaaa 752
Query: 93 aaagaatcacttaaccatcttcagtgtagaaactatcagcagtatttaggagaaattggt 152
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aaagaatcacttaa-catcttcagtgtagaaactatcagcagtatttaggagaaattggt 693
Query: 153 gtgtccacaatgaagcctagtgagcaaaaaccaacagtaaagtcacactccccaagttat 212
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtgtccacaatgaagcccagtgagcaaaaaccaacagtaaagtcacactccccaagttat 633
Query: 213 tgagataataattcataagagtcctattgtctttaggcagatccttagatggacaaggtt 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgagataataattcataagagtcctattgtctttaggcagatccttagatggacaaggtt 573
Query: 273 atggaaaggcaaagctattcaacatgaaaatggtcataaacacatacaactggcttgatt 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 atggaaaggcaaagctattcaacatgaaaatggtcataaacacatacaactggcttgatt 513
Query: 333 ccagtggcaacaggaccgttttacaaaagatgccctaaaaagcaataagtataccaaaga 392
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ccagtggcaacaggagtgttttacaaaagatgccctaaaaagcaataagtataccaaaga 453
Query: 393 ttacttagccaattcactttacgttcatctcttctataaaagaaaactgaccatagtagt 452
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttacttagccaattcactttatgttcatctcttctataaaagaaaactgaccatagtagt 393
Query: 453 atattggtcctcaatttttatgagttttgtaatagttctgttctgttctaaggcaactag 512
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 392 atattggtcctcaatttttatgagttttgtaata-----gttctgttctaaggcaactag 338
Query: 513 acacttttctatgctagttcaaagatatgaaaataggcagcacaaagaagttggatagag 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 acacttttctatgctagttcaaagatatgaaaataggcagcacaaagaagttggatagag 278
Query: 573 gctggagaggtggctaagaacacttgctgcccttgcagagtcattatttgattcttagaa 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gctggagaggtggctaagaacacttgctgcccttgcagagtcattatttgattcttagaa 218
Query: 633 cccatgtaaggtagctcata 652
||||||||||||||||||||
Sbjct: 217 cccatgtaaggtagctcata 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1047
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1037
Effective search space: 666791
Effective search space used: 666791
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
