Query= MSMg01no318_j04.b1 MSMg01no318_j04.b1 CHROMAT_FILE:
MSMg01no318_j04.b1 PHD_FILE: MSMg01no318_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:46 2005
(372 letters)
>mm_chr6_36648363_36649133
Length = 771
Score = 696 bits (360), Expect = 0.0
Identities = 369/372 (99%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 1 aattcagtgtgtgttttatctttcaaagtcaacacccaggaacttcaattacctttataa 60
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aattcagtgtgtg-ttgatatttcaaagtcaacacccaggaacttcaattacctttataa 513
Query: 61 ccataaggtttgagggatggccaaatagactagaatgccagagaatttaggagatggtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ccataaggtttgagggatggccaaatagactagaatgccagagaatttaggagatggtaa 453
Query: 121 tggagcccttagataggttatccttgctaggtacaaaaactgaactatagacaaggcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tggagcccttagataggttatccttgctaggtacaaaaactgaactatagacaaggcagc 393
Query: 181 cagtaactatgacactaaatatttataactaggaaaggcagaaacagaagagcctggtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cagtaactatgacactaaatatttataactaggaaaggcagaaacagaagagcctggtgt 333
Query: 241 ttgttccctaaaatagttataattcactgctcaggttttaattctgcgctatatttttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttgttccctaaaatagttataattcactgctcaggttttaattctgcgctatatttttgt 273
Query: 301 atttataattaaattactgaaaacgggttgaggtcactaaaaggaagtctttatcacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atttataattaaattactgaaaacgggttgaggtcactaaaaggaagtctttatcacaag 213
Query: 361 atggcaatgaaa 372
||||||||||||
Sbjct: 212 atggcaatgaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 771
Length adjustment: 9
Effective length of query: 363
Effective length of database: 762
Effective search space: 276606
Effective search space used: 276606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_j04.g1 MSMg01no318_j04.g1 CHROMAT_FILE:
MSMg01no318_j04.g1 PHD_FILE: MSMg01no318_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:47 2005
(348 letters)
>mm_chr6_36466682_36467429
Length = 748
Score = 658 bits (340), Expect = 0.0
Identities = 346/348 (99%)
Strand = Plus / Plus
Query: 1 agtgcaggagtcagtgtgcttcctgactcacagagatatgattttaaagcttacaagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 201 agtgcaggagtcagtgtgcttcctgactcacagagatatgattttaaagcttaaaaacca 260
Query: 61 agctgagcatggtggtgcatgcctttaatcacagctctttggaagcagaggcagatgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgagcatggtggtgcatgcctttaatcacagctctttggaagcagaggcagatgagt 320
Query: 121 ctctatgagttcaaggccagcctggtctataaagcaaatccaggacagatagggctctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctatgagttcaaggccagcctggtctataaagcaaatccaggacagatagggctctgt 380
Query: 181 tccacagagaaaccctgtctcggtaaaccaaaccaaccaagcaaaccacaataacaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccacagagaaaccctgtctcggtaaaccaaaccaaccaagcaaaccacaataacaatga 440
Query: 241 tgacattaacaacgaatgtccgataacaaacgtaagcattctctggtttcaatgggctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgacattaacaacgaatgtccgataacaaacgtaagcattctctggtttcaatgggctta 500
Query: 301 tgcgtatccagaccccctttccactgtgtcaggaggaacaccgtgtga 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcgtatccagaccccctttccactgtgtcaggaggaacaccgtgtga 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
