Query= MSMg01no318_n07.b1 MSMg01no318_n07.b1 CHROMAT_FILE:
MSMg01no318_n07.b1 PHD_FILE: MSMg01no318_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:04 2005
(280 letters)
>mm_chr6_85095050_85095730
Length = 681
Score = 491 bits (254), Expect = e-143
Identities = 272/278 (97%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcctcctcctccccctggagcttagtt-aaggcaaggagaaggtgaaggtgga 62
||||||||||||||||||| ||| ||||||||| |||| |||||||||||||||||||
Sbjct: 204 ggaattctcctcctcctcctcctttagcttagttgaaggtgaggagaaggtgaaggtgga 263
Query: 63 gagaagaggctcagaagctctccgtaggaagcagggaaggtgtgaagatctcccaagcct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagaagaggctcagaagctctccgtaggaagcagggaaggtgtgaagatctcccaagcct 323
Query: 123 ggctgcacgcatttcaaggctttccctcggtggtgggagcagttgcccctgggtgactgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggctgcacgcatttcaaggctttccctcggtggtgggagcagttgcccctgggtgactgg 383
Query: 183 tgttgtagaaccaggtaggttgccctctcctcattgaatttttgctctctcagagggtca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgttgtagaaccaggtaggttgccctctcctcattgaatttttgctctctcagagggtca 443
Query: 243 atgatttctcaggcttctacctcatgactttcatggtc 280
||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgatttctcaggcttctacctcatgactttcatggtc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 681
Length adjustment: 9
Effective length of query: 271
Effective length of database: 672
Effective search space: 182112
Effective search space used: 182112
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_n07.g1 MSMg01no318_n07.g1 CHROMAT_FILE:
MSMg01no318_n07.g1 PHD_FILE: MSMg01no318_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:05 2005
(342 letters)
>mm_chr6_85243847_85244588
Length = 742
Score = 654 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Minus
Query: 1 ttttataataggcttgaaagcaaatatccctatcttcatactacaaaagagacattggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 ttttataataggcttgaaagcaaatatccctatcttcatactacaaaagagatattggag 562
Query: 61 gctcagaaagactaagtgaagaatctcccttctcctagtgaactaatgggggatttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctcagaaagactaagtgaagaatctcccttctcctagtgaactaatgggggatttgaaa 502
Query: 121 tcaaacctgggctcctctgcggggcctgacctctacctagagagaagtttcttgcataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaaacctgggctcctctgcggggcctgacctctacctagagagaagtttcttgcataat 442
Query: 181 gaagccacagctgctgacacagtaccacagaagcaggcaggacatccctcttctttcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagccacagctgctgacacagtaccacagaagcaggcaggacatccctcttctttcctg 382
Query: 241 tgtctgtagaattgggggctccctgcaccccacataggcttgtataggtacatggtacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtctgtagaattgggggctccctgcaccccacataggcttgtataggtacatggtacct 322
Query: 301 ggagttaccatggcaacacaattaatggtgcgctataacgca 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagttaccatggcaacacaattaatggtgcgctataacgca 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
