Query= MSMg01no318_o13.b1 MSMg01no318_o13.b1 CHROMAT_FILE:
MSMg01no318_o13.b1 PHD_FILE: MSMg01no318_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:10 2005
(240 letters)
>mm_chr6_29011465_29012105
Length = 641
Score = 420 bits (217), Expect = e-122
Identities = 232/237 (97%), Gaps = 1/237 (0%)
Strand = Plus / Minus
Query: 1 gaatgctc-atgatatacaccccacaagaattccatgttcctgtagaccctgctctattt 59
|||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 437 gaatgctcaatgatatccaccccacaagaattccatgttcctggagaccctgctctatct 378
Query: 60 ccctgtatcctatgtgcctctagagggatacagggtgtggggtgcaacaatgactggtgc 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 377 ccctgtatcctatgtgcctctagagggatacagggtatggggtgcaacaatgactggtgc 318
Query: 120 tctgtaaagggaattgtctccggcagccatctctgcatcccacatgggtcactcagacat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tctgtaaagggaattgtctccggcagccatctctgcatcccacatgggtcactcagacat 258
Query: 180 gcgaggcatctgcccggggctgatggacaagaatttattacagcatccctggctctg 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcgaggcatctgcccggggctgatggacaagaatttattacagcatccctggctctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_o13.g1 MSMg01no318_o13.g1 CHROMAT_FILE:
MSMg01no318_o13.g1 PHD_FILE: MSMg01no318_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:10 2005
(344 letters)
>mm_chr6_28858940_28859683
Length = 744
Score = 636 bits (329), Expect = 0.0
Identities = 338/341 (99%)
Strand = Plus / Plus
Query: 1 ctcggctggagttggagagggcggggaccgctgtcctctcccgtcctgggaccatccaac 60
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ctcggctggagttggggagggcggggaccgctgtcctctcccatcctgggaccatccaac 260
Query: 61 cctcagcagccctccccaggtcctcgcctgctttagcagttggtattcaggcgtacacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcagcagccctccccaggtcctcgcctgctttagcagttggtattcaggcgtacacta 320
Query: 121 gctcttcttgcctatgtagctgtgagagccatcttccttcaactcccttttaaagggccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcttcttgcctatgtagctgtgagagccatcttccttcaactcccttttaaagggccg 380
Query: 181 ttgagcccaacctaatatttaatgaagagttcaccctcacctcaggatgcttggattcac 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgagcccaacctaacatttaatgaagagttcaccctcacctcaggatgcttggattcac 440
Query: 241 tctttactctctagggtcctcttacagctgccctctcgcctgcccatccgctctgttccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttactctctagggtcctcttacagctgccctctcgcctgcccatccgctctgttccc 500
Query: 301 cagccacctgcctcccctaactgaccctgcacccctgttaa 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagccacctgcctcccctaactgaccctgcacccctgttaa 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
