Query= MSMg01no319_h20.b1 MSMg01no319_h20.b1 CHROMAT_FILE:
MSMg01no319_h20.b1 PHD_FILE: MSMg01no319_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:50 2005
(297 letters)
>mm_chr6_112163322_112164017
Length = 696
Score = 468 bits (242), Expect = e-136
Identities = 292/334 (87%), Gaps = 41/334 (12%)
Strand = Plus / Minus
Query: 1 attttattagcaacattatgatctttttaaaatacaagctatttcagagctc--ttcccg 58
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 397 attttattagcaacattatgatctttttaaaatacaagctatttcagagctcttttc--- 341
Query: 59 gggaggtatagagcacagattattgatactagttagcctgttgttactcctgccaagaca 118
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 340 gggaggtatagagcacagattattgatactagttagcctgttgttgctcctgccaagaca 281
Query: 119 gcgctatccaccagctctcttagatattcttcagctgattctacttccctccttccacct 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gcgctatccaccagctctcttagatattcttcagctgattctacttccctccttccacct 221
Query: 179 ccttgagcatagcaattggaccagcctcagccccagccccagccccagccc--------- 229
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ccttgagcatagcaattggaccagcctcagccccagccccagccccagccccagccccag 161
Query: 230 ---------------------------tagccccaggcacagggcaggcactcacttacc 262
|||||||||||||||||||||||||||||||||
Sbjct: 160 ccccagccccagccccagccccagccctagccccaggcacagggcaggcactcacttacc 101
Query: 263 acttgattatgcttgctaagtttgttcatacttg 296
||||||||||||||||||||||||||||||||||
Sbjct: 100 acttgattatgcttgctaagtttgttcatacttg 67
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 696
Length adjustment: 9
Effective length of query: 288
Effective length of database: 687
Effective search space: 197856
Effective search space used: 197856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_h20.g1 MSMg01no319_h20.g1 CHROMAT_FILE:
MSMg01no319_h20.g1 PHD_FILE: MSMg01no319_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:50 2005
(345 letters)
>mm_chr6_112007906_112008650
Length = 745
Score = 621 bits (321), Expect = 0.0
Identities = 339/345 (98%)
Strand = Plus / Plus
Query: 1 ctcttctgctacaaaccacttgttagtctgctaagaacagctttctctttttataaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcttctgctacaaaccacttgttagtctgctaagaacagctttctctttttataaattg 260
Query: 61 gcacagagttgttgtacatagtgatgggcttcataaacaaaattttcttatttattgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacagagttgttgtacatagtgatgggcttcataaacaaaattttcttatttattgttt 320
Query: 121 taagtcaggaagctttcttcaggaacatttagaaggcaataattatgagggaagattgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagtcaggaagctttcttcaggaacatttagaaggcaataattatgagggaagattgca 380
Query: 181 aatttaaaaattctgcttgacaaagaatacttttaaagaaaataattcatagactgaaat 240
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 381 aatttaaaaattctgcttgacaaagaacacttttaaagaaaataatccatagactgaaat 440
Query: 241 cagttatatgcaaagcccacaccagacagaacaagccacacaaaagctgcttttctgaga 300
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 441 cagttatatgcaaagcccacaccaggcagaacaagccacataaaagctgcttttctgaga 500
Query: 301 agctaacttcattcccattttggttttgcctgaaggagaaaagtc 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agctaacttcattcccattttggttttgcctgaaggagaaaagtc 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
