TCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNGNG
GAATTNNTCTCTTTGCCTGATGACCCACTTTACTATTCTGCCTTTTGCTA
TAGATCATAGGCTTTTTATTCTACATAATCACAAAGTACCTTAGGTAGGT
AAGTAAGGACAGAGACACATACATCTTCATACCATGAACAAAAACATCAT
TCCAACAGACATCTATCTCTTTTGCCTTTTTAGCATTCAGCCCCCTGCTA
GTCATTAGAGTAGGCAGGGACTAACTCTTATAGGGGCCAACATTTAATTG
GGGCTGGCTTACAGGTTCATTGTATTTGTTCATTATCCTCATAGTCGGAA
GTATAGCATTGTTTTTTTCCACCCCCCCCCCCCCCGAGACAAAAGTTCTA
TATGTTGTTTTTGTTGCCCCCCCCCCCAAATGAAATTATATAGATTGTCA
GGATGAGGTTGTCTTCTATCATTGGGATGCATTTGACTACAGGATTCTCT
ATGTGTACCCCTACGGTGTAGGGGGTGCTTCCAATATTATTATGCCTACT
TTATTTGTAGCCCATTCTGCCGAAGGTGGTGAATCTCGGTGGATAGGAGG
ACGTCAATATATAAGCGTAACTAAAATATAGTCAACGTATGATTCTCAGG
TTCACATAAATGCAAAATTTTTGTATATAGGGATAGTTAGATTAGGTTAG
TGGTGTATGTCAATATTGTGGGTCTGGGGTGGTCTTGTTTGC

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGCTGAAATATAAGTCCTCTGTCA
GTATCCCTTAACTTAAGAGACTCTCTAGTGCCATTTGAAAATGGACCAAT
TAATTTAGAGTCAAGAATATTGTAATGTGGGTAGAATATACTTTTATTTT
CCCAAAGCACTACTAGTCCTTCTCTTGGTCCTACTCCTTAATGCTATCCA
AAGTATTGTAATGTTTGTATTTGTGATGAACCACTGAGGCTTCGAGCTCA
GTCTCAAGTGTTTAAACTTTGTCTTCAAAGCACAAGGCAATATTGCAAGA
TTTGAATTCTTTCTTGTGTTCGTTGCATGGGAAGAAAACTAAGGAGGATC
ACTCAGCACACTTTTTGACCACCGTTCCTTTCTTCATCTTCTCGCCTGTT
ACTGACAGATCCCATTTCCTGGGAAAAGCATGTGTTCAATTCCAATCTCA
GGTCCATTTCCTGACACTCTAATGTTTGAACTTTTGTGCAGTCTTGGTCC
TCAAAAGGACTGTATTTCCTTGAGAAAGAGCTTTGGAGGCCTCCTGGAGC
ATGAATTTCAACAGAGTGAAAACAGGAAGCAAACTGCTTTCTATTCTAAT
GAATTGCTAAATGACATTACCTGCAAATAGCAAAGCTTGCTAGTAAGTCT
CCCCTAGCCTAAACTCATC

Query= MSMg01no319_j15.g1 MSMg01no319_j15.g1 CHROMAT_FILE:
MSMg01no319_j15.g1 PHD_FILE: MSMg01no319_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:58 2005
         (635 letters)



>mm_chr6_47213255_47214288
          Length = 1034

 Score = 1060 bits (548), Expect = 0.0
 Identities = 597/634 (94%), Gaps = 33/634 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgctgaaatataagtcctctgtcagtatcccttaacttaagagactctctagtgccat 60
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tttgctgaaatataagtcctctgtcagtatcccttaacttaagagactct-tagtgccat 259

                                                                       
Query: 61  ttgaaaatggaccaattaatttagagtcaagaatattgtaatgtgggtagaatatacttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttgaaaatggaccaattaatttagagtcaagaatattgtaatgtgggtagaatatacttt 319

                                                                       
Query: 121 tattttcccaaagcactactagtccttctcttggtcctactccttaatgctatccaaagt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 320 tattttcccaaagcactactagtccttctcttggtcctactccttaatgctatccagagt 379

                                                                       
Query: 181 attgtaatgtttgtatttgtgatgaaccactgaggcttcgagctcagtctcaagtgttta 240
           ||||||||||||||||||||||||||||||||||||||||||                  
Sbjct: 380 attgtaatgtttgtatttgtgatgaaccactgaggcttcgag------------------ 421

                                                                       
Query: 241 aactttgtcttcaaagcacaaggcaatattgcaagatttgaattctttcttgtgttcgtt 300
                         ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 --------------agcacaaggcaatattgcaagatttgaattctttcttgtgttcgtt 467

                                                                       
Query: 301 gcatgggaagaaaactaaggaggatcactcagcacactttttgaccaccgttcctttctt 360
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 468 gcatgggaagaaaactaaggaggatcactcagcacactttttgaaaaccgttcctttctt 527

                                                                       
Query: 361 catcttctcgcctgttactgacagatcccatttcctgggaaaagcatgtgttcaattcca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 catcttctcgcctgttactgacagatcccatttcctgggaaaagcatgtgttcaattcca 587

                                                                       
Query: 421 atctcaggtccatttcctgacactctaatgtttgaacttttgtgcagtcttggtcctcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atctcaggtccatttcctgacactctaatgtttgaacttttgtgcagtcttggtcctcaa 647

                                                                       
Query: 481 aaggactgtatttccttgagaaagagctttggaggcctcctggagcatgaatttcaacag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aaggactgtatttccttgagaaagagctttggaggcctcctggagcatgaatttcaacag 707

                                                                       
Query: 541 agtgaaaacaggaagcaaactgctttctattctaatgaattgctaaatgacattacctgc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 agtgaaaacaggaagcaaactgctttctattctaatgaattgctaaatgacattacctgc 767

                                             
Query: 601 aaatagcaaagcttgctagtaagtctcccctagc 634
           |||||||||||||||||||| |||||||||||||
Sbjct: 768 aaatagcaaagcttgctagtgagtctcccctagc 801


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1034
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1024
Effective search space:   640000
Effective search space used:   640000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)