Query= MSMg01no320_j11.b1 MSMg01no320_j11.b1 CHROMAT_FILE:
MSMg01no320_j11.b1 PHD_FILE: MSMg01no320_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:08 2005
(231 letters)
>mm_chr6_44618433_44619062
Length = 630
Score = 431 bits (223), Expect = e-125
Identities = 229/231 (99%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 1 aatcaattagtaccaattaatgtgtacatatctgaggttgttttcaatcggccaattatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatcaattagtaccaattaatgtgtacatatctgaggttgttttcaatcggccaattatt 260
Query: 61 gactgaatataacaagtcctacttatttgttaagaatttatttcctgtgttaaaatattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactgaatataacaagtcctacttatttgttaagaatttatttcctgtgttaaaatattt 320
Query: 121 tcaatacctatttttctttgctctattaattacattattgttttagtaaagatcactacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaatacctatttttctttgctctattaattacattattgttttagtaaagatcactacc 380
Query: 181 aggtatgattttattttaatattcagcttacttcttattttttacttatta 231
|||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 aggtatgaatttattttaatattcagcttacttctt-ttttttacttatta 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 630
Length adjustment: 9
Effective length of query: 222
Effective length of database: 621
Effective search space: 137862
Effective search space used: 137862
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_j11.g1 MSMg01no320_j11.g1 CHROMAT_FILE:
MSMg01no320_j11.g1 PHD_FILE: MSMg01no320_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:08 2005
(282 letters)
>mm_chr6_44753210_44753891
Length = 682
Score = 538 bits (278), Expect = e-157
Identities = 281/282 (99%)
Strand = Plus / Minus
Query: 1 aagatgagactttcaggtttgggaatatctggctggacctcacacttcacactcttgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aagatgagactttcaggtttgggaatatctggctggacctcacacttcacactcttgctc 423
Query: 61 catgcccaccctcaccccactaccactcaaatgcatttgccccagagttcacatatttca 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 422 catgcccaccctcaccccactaccacacaaatgcatttgccccagagttcacatatttca 363
Query: 121 tacttttattataattttctttaggtaatttatgatttgttctttttttacttcttctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tacttttattataattttctttaggtaatttatgatttgttctttttttacttcttctaa 303
Query: 181 aattgttgtggtatagaaaactctaattcaaattccaaagtttgactgatatttttagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aattgttgtggtatagaaaactctaattcaaattccaaagtttgactgatatttttagtt 243
Query: 241 ttttgtatcattaaaatcaatcctaaataaagtaggttttga 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttttgtatcattaaaatcaatcctaaataaagtaggttttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
