MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-321H04
Chromosome	6 (Build37)
Map Location	113,538,088 - 113,538,304
singlet/doublet	singlet
Overlap gene	Fancd2
Upstream gene	EG434077, Rad18, Srgap3, EG666387, EG620161, LOC666397, Thumpd3, EG434078, Setd5, Lhfpl4, Mtmr14, Cpne9, Brpf1, Ogg1, Camk1, Tada3l, Arpc4, Ttll3, Rpusd3, Cidec, Jagn1, Il17re, Il17rc, Creld1, Prrt3, Tmem111
Downstream gene	4931417G12Rik, 6720456B07Rik, Vhlh, Irak2, Tatdn2, Ghrl, Sec13, Atp2b2, Slc6a11, LOC666491, Slc6a1, Hrh1
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG434077 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434077 MGI:3645010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 215 ESTs, 4 Proteins

name	Rad18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58186 MGI:1890476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srgap3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259302 MGI:2152938
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666387 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666387 MGI:3643192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs

name	EG620161 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620161 MGI:3648731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins

name	LOC666397 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666397
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Thumpd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14911 MGI:1277973
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434078 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434078 MGI:3645011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Setd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72895 MGI:1920145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lhfpl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269788 MGI:3057108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtmr14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97287 MGI:1916075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpne9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211232 MGI:2443052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brpf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78783 MGI:1926033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ogg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18294 MGI:1097693
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Camk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52163 MGI:1098535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tada3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101206 MGI:1915724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arpc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68089 MGI:1915339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttll3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101100 MGI:2141418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpusd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101122 MGI:2141440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 35 ESTs, 4 Proteins

name	Cidec (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14311 MGI:95585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Jagn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67767 MGI:1915017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il17re (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57890 MGI:1889371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Il17rc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171095 MGI:2159336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Creld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171508 MGI:2152539
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prrt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210673 MGI:2444810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem111 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66087 MGI:1913337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fancd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211651 MGI:2448480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931417G12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70979 MGI:1918229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6720456B07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101314 MGI:1915406
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vhlh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22346 MGI:103223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Irak2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108960 MGI:2429603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tatdn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381801 MGI:3576210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ghrl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58991 MGI:1930008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110379 MGI:99832
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp2b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11941 MGI:105368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Slc6a11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243616 MGI:95630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666491 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666491
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	Slc6a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232333 MGI:95627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hrh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15465 MGI:107619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434077 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378025 GeneID:434077 MGI:3645010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 215 ESTs, 4 Proteins product : predicted gene, EG434077 transcript_id : XM_485815.4

name	Rad18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946725 GeneID:58186 MGI:1890476
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD18 homolog (S. cerevisiae) transcript_id : NM_021385.1

name	Srgap3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125345725 GeneID:259302 MGI:2152938
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLIT-ROBO Rho GTPase activating protein 3 transcript_id : NM_080448.3

name	EG666387 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378030 GeneID:666387 MGI:3643192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs product : predicted gene, EG666387 transcript_id : XM_983525.1

name	EG620161 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255398 GeneID:620161 MGI:3648731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : predicted gene, EG620161 transcript_id : XM_884551.3

name	Thumpd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982314 GeneID:14911 MGI:1277973
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : THUMP domain containing 3 transcript_id : NM_008188.2

name	EG434078 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83029581 GeneID:434078 MGI:3645011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG434078 transcript_id : XM_489149.3

name	Setd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31742487 GeneID:72895 MGI:1920145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 5 transcript_id : NM_028385.1

name	Lhfpl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922608 GeneID:269788 MGI:3057108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipoma HMGIC fusion partner-like protein 4 transcript_id : NM_177763.3

name	Mtmr14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930426 GeneID:97287 MGI:1916075
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotubularin related protein 14 transcript_id : NM_026849.1

name	Cpne9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76881815 GeneID:211232 MGI:2443052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : copine family member IX transcript_id : NM_170673.3

name	Brpf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794209 GeneID:78783 MGI:1926033
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain and PHD finger containing, 1 transcript_id : NM_030178.1

name	Ogg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374385 GeneID:18294 MGI:1097693
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 8-oxoguanine DNA-glycosylase 1 transcript_id : NM_010957.3

name	Camk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129899 GeneID:52163 MGI:1098535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium/calmodulin-dependent protein kinase I transcript_id : NM_133926.2

name	Tada3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129897 GeneID:101206 MGI:1915724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcriptional adaptor 3 (NGG1 homolog, yeast)-like transcript_id : NM_133932.2

name	Arpc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365377 GeneID:68089 MGI:1915339
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin related protein 2/3 complex, subunit 4 transcript_id : NM_026552.2

name	Ttll3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350803 GeneID:101100 MGI:2141418
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin tyrosine ligase-like family, member 3 transcript_id : NM_133923.4

name	Rpusd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378026 GeneID:101122 MGI:2141440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 35 ESTs, 4 Proteins product : RNA pseudouridylate synthase domain containing 3, transcript variant 1 transcript_id : XM_132830.8

name	Cidec (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802598 GeneID:14311 MGI:95585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell death-inducing DFFA-like effector c transcript_id : NM_178373.3

name	Jagn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350585 GeneID:67767 MGI:1915017
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : jagunal homolog 1 (Drosophila) transcript_id : NM_026365.2

name	Il17re (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801849 GeneID:57890 MGI:1889371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17 receptor E transcript_id : NM_145826.3

name	Il17re (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77404278 GeneID:57890 MGI:1889371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17 receptor E transcript_id : NM_001034031.1

name	Il17re (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77404280 GeneID:57890 MGI:1889371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17 receptor E transcript_id : NM_001034029.1

name	Il17rc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30841017 GeneID:171095 MGI:2159336
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 17 receptor C transcript_id : NM_134159.2

name	Creld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527147 GeneID:171508 MGI:2152539
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich with EGF-like domains 1 transcript_id : NM_133930.1

name	Prrt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130011 GeneID:210673 MGI:2444810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline-rich transmembrane protein 3 transcript_id : NM_172487.3

name	Tmem111 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383973 GeneID:66087 MGI:1913337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 111 transcript_id : NM_175101.3

name	Fancd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802416 GeneID:211651 MGI:2448480
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fanconi anemia, complementation group D2 transcript_id : NM_001033244.2

name	4931417G12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802852 GeneID:70979 MGI:1918229
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4931417G12 gene transcript_id : NM_027633.2

name	6720456B07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527153 GeneID:101314 MGI:1915406
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6720456B07 gene transcript_id : NM_133937.1

name	Vhlh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130344 GeneID:22346 MGI:103223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : von Hippel-Lindau syndrome homolog transcript_id : NM_009507.3

name	Irak2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802874 GeneID:108960 MGI:2429603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin-1 receptor-associated kinase 2 transcript_id : NM_172161.3

name	Tatdn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345009 GeneID:381801 MGI:3576210
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TatD DNase domain containing 2 transcript_id : NM_001033463.2

name	Ghrl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358944 GeneID:58991 MGI:1930008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ghrelin transcript_id : NM_021488.4

name	Sec13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385772 GeneID:110379 MGI:99832
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC13 homolog (S. cerevisiae) transcript_id : NM_024206.4

name	Atp2b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80861455 GeneID:11941 MGI:105368
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, Ca++ transporting, plasma membrane 2 transcript_id : NM_009723.2

name	Atp2b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80861453 GeneID:11941 MGI:105368
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, Ca++ transporting, plasma membrane 2 transcript_id : NM_001036684.1

name	Slc6a11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367467 GeneID:243616 MGI:95630
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, GABA), member 11 transcript_id : NM_172890.2

name	Slc6a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366248 GeneID:232333 MGI:95627
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, GABA), member 1 transcript_id : NM_178703.3

name	Hrh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345432 GeneID:15465 MGI:107619
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histamine receptor H 1 transcript_id : NM_008285.3

name	EG434077 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51716991 GeneID:434077 MGI:3645010
definition	codon_start : 1 product : similar to RIKEN cDNA 0610010K06 gene protein_id : XP_485815.1

name	Rad18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946726 GeneID:58186 MGI:1890476
definition	GO_component : GO:0000785 - chromatin [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : post-replication repair protein RAD18SC product : RAD18 homolog protein_id : NP_067360.1

name	Srgap3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125345726 GeneID:259302 MGI:2152938
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : rho GTPase activating protein 14; SLIT-ROBO Rho GTPase activating protein 2 product : brain stress early protein Gbi protein_id : NP_536696.3

name	EG666387 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378031 GeneID:666387 MGI:3643192
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988619.1

name	EG620161 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029580 GeneID:620161 MGI:3648731
definition	codon_start : 1 product : similar to 40S ribosomal protein S29 protein_id : XP_889644.1

name	Thumpd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680129 CCDS:CCDS20410.1 GeneID:14911 MGI:1277973
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence IEA] [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : gene trap ROSA 26 antisense, Philippe Soriano product : THUMP domain containing 3 protein_id : NP_032214.1

name	EG434078 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029582 GeneID:434078 MGI:3645011
definition	codon_start : 1 product : hypothetical protein protein_id : XP_489149.3

name	Setd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31742488 CCDS:CCDS20411.1 GeneID:72895 MGI:1920145
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : SET domain containing 5 protein_id : NP_082661.1

name	Lhfpl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922609 GeneID:269788 MGI:3057108
definition	codon_start : 1 product : lipoma HMGIC fusion partner-like 4 protein_id : NP_808431.2

name	Mtmr14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930427 CCDS:CCDS20412.1 GeneID:97287 MGI:1916075
definition	codon_start : 1 product : myotubularin related protein 14 protein_id : NP_081125.1

name	Cpne9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28416905 CCDS:CCDS20413.1 GeneID:211232 MGI:2443052
definition	codon_start : 1 product : copine-like protein protein_id : NP_733773.2

name	Brpf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794210 GeneID:78783 MGI:1926033
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : bromodomain containing 1 protein_id : NP_084454.1

name	Ogg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18921208 CCDS:CCDS20414.1 GeneID:18294 MGI:1097693
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IMP]; GO:0005634 - nucleus [Evidence IMP] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence TAS]; GO:0003906 - DNA-(apurinic or apyrimidinic site) lyase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0008017 - microtubule binding [Evidence IDA]; GO:0000702 - oxidized base lesion DNA N-glycosylase activity [Evidence TAS]; GO:0008534 - oxidized purine base lesion DNA N-glycosylase activity [Evidence IMP] [Evidence IDA] GO_process : GO:0006284 - base-excision repair [Evidence IMP] [Evidence IDA]; GO:0006281 - DNA repair [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : 8-oxoguanine DNA-glycosylase 1 protein_id : NP_035087.2

name	Camk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527140 CCDS:CCDS20415.1 GeneID:52163 MGI:1098535
definition	GO_component : GO:0005954 - calcium- and calmodulin-dependent protein kinase complex [Evidence TAS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0006913 - nucleocytoplasmic transport [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 product : calcium/calmodulin-dependent protein kinase I protein_id : NP_598687.1

name	Tada3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149314 CCDS:CCDS20416.1 GeneID:101206 MGI:1915724
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : transcriptional adaptor 3-like protein_id : NP_598693.1

name	Arpc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386054 CCDS:CCDS20417.1 GeneID:68089 MGI:1915339
definition	GO_component : GO:0005885 - Arp2/3 protein complex [Evidence TAS]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0030041 - actin filament polymerization [Evidence IEA]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : actin related protein 2/3 complex, subunit 4 (20 kDa) product : actin related protein 2/3 complex, subunit 4 protein_id : NP_080828.1

name	Ttll3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66793427 GeneID:101100 MGI:2141418
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004835 - tubulin-tyrosine ligase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : tubulin tyrosine ligase-like family, member 3 protein_id : NP_598684.3

name	Rpusd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63548662 GeneID:101122 MGI:2141440
definition	codon_start : 1 product : RNA pseudouridylate synthase domain containing 3 isoform 1 protein_id : XP_132830.4

name	Cidec (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30410022 CCDS:CCDS20418.1 GeneID:14311 MGI:95585
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS] codon_start : 1 note : CIDE-3alpha; fat specific gene 27 product : cell death-inducing DFFA-like effector c protein_id : NP_848460.1

name	Jagn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385862 CCDS:CCDS20419.1 GeneID:67767 MGI:1915017
definition	codon_start : 1 product : jagunal homolog 1 protein_id : NP_080641.1

name	Il17re (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559935 CCDS:CCDS20420.1 GeneID:57890 MGI:1889371
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : interleukin 17 receptor E isoform 1 protein_id : NP_665825.2

name	Il17re (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77404281 CCDS:CCDS20421.1 GeneID:57890 MGI:1889371
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : interleukin 17 receptor E isoform 2 protein_id : NP_001029201.1

name	Il17re (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77404279 CCDS:CCDS20421.1 GeneID:57890 MGI:1889371
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : interleukin 17 receptor E isoform 3 protein_id : NP_001029203.1

name	Il17rc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30841018 CCDS:CCDS20422.1 GeneID:171095 MGI:2159336
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : interleukin 17 receptor-like product : interleukin 17 receptor C protein_id : NP_598920.2

name	Creld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527148 CCDS:CCDS20423.1 GeneID:171508 MGI:2152539
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cysteine-rich with EGF-like domains 1 protein_id : NP_598691.1

name	Prrt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66793406 CCDS:CCDS20424.1 GeneID:210673 MGI:2444810
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : proline-rich transmembrane protein 3 protein_id : NP_766075.2

name	Tmem111 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28827824 CCDS:CCDS20425.1 GeneID:66087 MGI:1913337
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66087 protein_id : NP_780310.1

name	Fancd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776592 CCDS:CCDS20426.1 GeneID:211651 MGI:2448480
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000793 - condensed chromosome [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Fanconi anemia, complementation group D2 protein_id : NP_001028416.1

name	4931417G12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037227 CCDS:CCDS20427.1 GeneID:70979 MGI:1918229
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC70979 protein_id : NP_081909.1

name	6720456B07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527154 GeneID:101314 MGI:1915406
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : hypothetical protein LOC101314 protein_id : NP_598698.1

name	Vhlh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678567 CCDS:CCDS20429.1 GeneID:22346 MGI:103223
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001525 - angiogenesis [Evidence IMP]; GO:0043534 - blood vessel endothelial cell migration [Evidence IMP]; GO:0007049 - cell cycle [Evidence IEA]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0016567 - protein ubiquitination [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : von Hippel-Lindau syndrome protein homolog protein_id : NP_033533.1

name	Irak2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543003 CCDS:CCDS20430.1 GeneID:108960 MGI:2429603
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence IDA]; GO:0007250 - activation of NF-kappaB-inducing kinase [Evidence IDA]; GO:0031663 - lipopolysaccharide-mediated signaling pathway [Evidence IDA]; GO:0043433 - negative regulation of transcription factor activity [Evidence IDA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : interleukin-1 receptor-associated kinase 2c product : interleukin-1 receptor-associated kinase 2 protein_id : NP_751893.2

name	Tatdn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677456 CCDS:CCDS20431.1 GeneID:381801 MGI:3576210
definition	codon_start : 1 exception : mismatches in translation product : TatD DNase domain containing 2 protein_id : NP_001028635.1

name	Ghrl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19224664 CCDS:CCDS20432.1 GeneID:58991 MGI:1930008
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005576 - extracellular region [Evidence IDA]; GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0031768 - ghrelin receptor binding [Evidence ISS]; GO:0016608 - growth hormone-releasing hormone activity [Evidence ISS]; GO:0005179 - hormone activity [Evidence TAS] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS]; GO:0030252 - growth hormone secretion [Evidence ISS]; GO:0009755 - hormone-mediated signaling [Evidence ISS]; GO:0040018 - positive regulation of body size [Evidence ISS]; GO:0050791 - regulation of physiological process [Evidence IEA] codon_start : 1 note : motilin-related peptide; proghrelin product : ghrelin protein_id : NP_067463.2

name	Sec13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29150272 GeneID:110379 MGI:99832
definition	GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence ISS] codon_start : 1 note : SEC13 related product : SEC13-like 1 protein_id : NP_077168.2

name	Atp2b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753140 CCDS:CCDS20433.1 GeneID:11941 MGI:105368
definition	GO_component : GO:0043025 - cell soma [Evidence IDA]; GO:0005929 - cilium [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0015085 - calcium ion transporter activity [Evidence IEA]; GO:0005388 - calcium-transporting ATPase activity [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IMP]; GO:0006816 - calcium ion transport [Evidence IMP] [Evidence IEA]; GO:0006812 - cation transport [Evidence IEA]; GO:0000902 - cell morphogenesis [Evidence IMP]; GO:0021707 - cerebellar granule cell differentiation [Evidence IMP]; GO:0021702 - cerebellar Purkinje cell differentiation [Evidence IMP]; GO:0046068 - cGMP metabolism [Evidence IMP]; GO:0050910 - detection of mechanical stimulus during sensory perception of sound [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0007595 - lactation [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0045299 - otolith mineralization [Evidence IMP]; GO:0050885 - regulation of balance [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence IMP] [Evidence IGI]; GO:0042428 - serotonin metabolism [Evidence IMP]; GO:0050808 - synapse organization and biogenesis [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; wriggle; deaf waddler product : plasma membrane calcium ATPase 2 isoform 1 protein_id : NP_033853.1

name	Atp2b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:80861454 CCDS:CCDS20433.1 GeneID:11941 MGI:105368
definition	GO_component : GO:0043025 - cell soma [Evidence IDA]; GO:0005929 - cilium [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0015085 - calcium ion transporter activity [Evidence IEA]; GO:0005388 - calcium-transporting ATPase activity [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IMP]; GO:0006816 - calcium ion transport [Evidence IMP] [Evidence IEA]; GO:0006812 - cation transport [Evidence IEA]; GO:0000902 - cell morphogenesis [Evidence IMP]; GO:0021707 - cerebellar granule cell differentiation [Evidence IMP]; GO:0021702 - cerebellar Purkinje cell differentiation [Evidence IMP]; GO:0046068 - cGMP metabolism [Evidence IMP]; GO:0050910 - detection of mechanical stimulus during sensory perception of sound [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0007595 - lactation [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0045299 - otolith mineralization [Evidence IMP]; GO:0050885 - regulation of balance [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence IMP] [Evidence IGI]; GO:0042428 - serotonin metabolism [Evidence IMP]; GO:0050808 - synapse organization and biogenesis [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; wriggle; deaf waddler product : plasma membrane calcium ATPase 2 isoform 2 protein_id : NP_001031761.1

name	Slc6a11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370360 GeneID:243616 MGI:95630
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005332 - gamma-aminobutyric acid:sodium symporter activity [Evidence IEA]; GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : gamma-aminobutyric acid (GABA-A) transporter 4 protein_id : NP_766478.1

name	Slc6a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520131 CCDS:CCDS20434.1 GeneID:232333 MGI:95627
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : gamma-aminobutyric acid (GABA-A) transporter 1 product : solute carrier family 6 (neurotransmitter transporter, GABA), member 1 protein_id : NP_848818.1

name	Hrh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542963 CCDS:CCDS20435.1 GeneID:15465 MGI:107619
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0048511 - rhythmic process [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Bordetella pertussis induced histamine sensitization; Histamine H1 receptor product : histamine receptor H 1 protein_id : NP_032311.2

name	LOC666397 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666397
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:96455
definition	standard_name : RH102121

name	(CDS detail)
type	STS
link
xref	UniSTS:125292
definition	standard_name : MHAa70g1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:215151
definition	standard_name : RH131868

name	(CDS detail)
type	STS
link
xref	UniSTS:159556
definition	standard_name : AI452337

name	(CDS detail)
type	STS
link
xref	UniSTS:123899
definition	standard_name : 30.MMHAP28FRB12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130882
definition	standard_name : D6Mit328

name	(CDS detail)
type	STS
link
xref	UniSTS:208009
definition	standard_name : AI036285

name	(CDS detail)
type	STS
link
xref	UniSTS:213491
definition	standard_name : RH130204

name	(CDS detail)
type	STS
link
xref	UniSTS:179432
definition	standard_name : AW556087

name	(CDS detail)
type	STS
link
xref	UniSTS:179433
definition	standard_name : AV258896

name	(CDS detail)
type	STS
link
xref	UniSTS:271057
definition	standard_name : PMC150244P1

name	(CDS detail)
type	STS
link
xref	UniSTS:235520
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:210580
definition	standard_name : RH136600

name	(CDS detail)
type	STS
link
xref	UniSTS:210571
definition	standard_name : RH136591

name	(CDS detail)
type	STS
link
xref	UniSTS:230202
definition	standard_name : G66214

name	(CDS detail)
type	STS
link
xref	UniSTS:64710
definition	standard_name : RH12737

name	(CDS detail)
type	STS
link
xref	UniSTS:164334
definition	standard_name : AI604880

name	(CDS detail)
type	STS
link
xref	UniSTS:130931
definition	standard_name : D6Mit378

name	(CDS detail)
type	STS
link
xref	UniSTS:159557
definition	standard_name : AW553738

name	(CDS detail)
type	STS
link
xref	UniSTS:208011
definition	standard_name : BB407082

name	(CDS detail)
type	STS
link
xref	UniSTS:144081
definition	standard_name : Ogg1

name	(CDS detail)
type	STS
link
xref	UniSTS:167474
definition	standard_name : D6Ertd263e

name	(CDS detail)
type	STS
link
xref	UniSTS:159558
definition	standard_name : AI505105

name	(CDS detail)
type	STS
link
xref	UniSTS:130643
definition	standard_name : D6Mit10

name	(CDS detail)
type	STS
link
xref	UniSTS:208013
definition	standard_name : BB284401

name	(CDS detail)
type	STS
link
xref	UniSTS:164336
definition	standard_name : AI987856

name	(CDS detail)
type	STS
link
xref	UniSTS:270317
definition	standard_name : PMC117179P1

name	(CDS detail)
type	STS
link
xref	UniSTS:268964
definition	standard_name : MARC_26162-26163:1030455175:1

name	(CDS detail)
type	STS
link
xref	UniSTS:238061
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179434
definition	standard_name : AI327076

name	(CDS detail)
type	STS
link
xref	UniSTS:179435
definition	standard_name : AI450050

name	(CDS detail)
type	STS
link
xref	UniSTS:124430
definition	standard_name : 41.MMHAP80FLF5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:164337
definition	standard_name : AI527266

name	(CDS detail)
type	STS
link
xref	UniSTS:143143
definition	standard_name : Fsp27

name	(CDS detail)
type	STS
link
xref	UniSTS:165481
definition	standard_name : AW146438

name	(CDS detail)
type	STS
link
xref	UniSTS:212888
definition	standard_name : RH129589

name	(CDS detail)
type	STS
link
xref	UniSTS:161809
definition	standard_name : RH124987

name	(CDS detail)
type	STS
link
xref	UniSTS:164335
definition	standard_name : AI843811

name	(CDS detail)
type	STS
link
xref	UniSTS:248834
definition	standard_name : BF415092

name	(CDS detail)
type	STS
link
xref	UniSTS:179436
definition	standard_name : AW260416

name	(CDS detail)
type	STS
link
xref	UniSTS:209995
definition	standard_name : RH135999

name	(CDS detail)
type	STS
link
xref	UniSTS:271784
definition	standard_name : PMC194856P1

name	(CDS detail)
type	STS
link
xref	UniSTS:130653
definition	standard_name : D6Mit11

name	(CDS detail)
type	STS
link
xref	UniSTS:271804
definition	standard_name : PMC196256P1

name	(CDS detail)
type	STS
link
xref	UniSTS:208012
definition	standard_name : AU015151

name	(CDS detail)
type	STS
link
xref	UniSTS:185678
definition	standard_name : BB137857

name	(CDS detail)
type	STS
link
xref	UniSTS:165482
definition	standard_name : AW011779

name	(CDS detail)
type	STS
link
xref	UniSTS:217900
definition	standard_name : RH134621

name	(CDS detail)
type	STS
link
xref	UniSTS:272192
definition	standard_name : PMC23053P2

name	(CDS detail)
type	STS
link
xref	UniSTS:272191
definition	standard_name : PMC23053P1

name	(CDS detail)
type	STS
link
xref	UniSTS:163396
definition	standard_name : U12570

name	(CDS detail)
type	STS
link
xref	UniSTS:144755
definition	standard_name : Vhlh

name	(CDS detail)
type	STS
link
xref	UniSTS:235523
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179439
definition	standard_name : AI649099

name	(CDS detail)
type	STS
link
xref	UniSTS:125454
definition	standard_name : MHAa97b9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:179438
definition	standard_name : AI646012

name	(CDS detail)
type	STS
link
xref	UniSTS:272300
definition	standard_name : PMC262394P1

name	(CDS detail)
type	STS
link
xref	UniSTS:272302
definition	standard_name : PMC262394P3

name	(CDS detail)
type	STS
link
xref	UniSTS:272301
definition	standard_name : PMC262394P2

name	(CDS detail)
type	STS
link
xref	UniSTS:234686
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:95075
definition	standard_name : G43664

name	(CDS detail)
type	STS
link
xref	UniSTS:150914
definition	standard_name : D3S2930E

name	(CDS detail)
type	STS
link
xref	UniSTS:43011
definition	standard_name : D3S3990

name	(CDS detail)
type	STS
link
xref	UniSTS:223409
definition	standard_name : RH141415

name	(CDS detail)
type	STS
link
xref	UniSTS:124504
definition	standard_name : 43.MMHAP59FLG4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124115
definition	standard_name : 34.MMHAP88FRD10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:142586
definition	standard_name : D6Mit30

name	(CDS detail)
type	STS
link
xref	UniSTS:130935
definition	standard_name : D6Mit383

name	(CDS detail)
type	STS
link
xref	UniSTS:130883
definition	standard_name : D6Mit329

name	(CDS detail)
type	STS
link
xref	UniSTS:143159
definition	standard_name : Gabt4

name	(CDS detail)
type	STS
link
xref	UniSTS:143158
definition	standard_name : Gabt4

name	(CDS detail)
type	STS
link
xref	UniSTS:130957
definition	standard_name : D6Mit55

name	(CDS detail)
type	STS
link
xref	UniSTS:143155
definition	standard_name : Gabt1

name	(CDS detail)
type	STS
link
xref	UniSTS:130965
definition	standard_name : D6Mit63

name	LOC666491 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255399 GeneID:666491
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : similar to Ac2-008 pseudo : _no_value transcript_id : XR_034873.1

clone name	MSMg01-065N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-321H04.T7 (MSMg01no321_h04.b1)	MSMg01-321H04.TJ (MSMg01no321_h04.g1)
ACC	AG440414	AG440415
length	773	744
length of high quality (start - end)	209 (71 - 279)	145 (127 - 271)
definition	CHROMAT_FILE: MSMg01no321_h04.b1 PHD_FILE: MSMg01no321_h04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:04:11 2005	CHROMAT_FILE: MSMg01no321_h04.g1 PHD_FILE: MSMg01no321_h04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:04:11 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGAATCCGCGGA ATTCAAAAATGTTTTGCCATACTGTTATTTCAAATGCAAGCTGTTCTTGC AACCAGGGCGGGCAAACTCTGCACGTTCTAGTCTGCGTTATACTCATCCT GGCCCTCAGATAGGAGCCCTGAGTCAGCTACTGATCTGCAGCTTCTCAAC CTGGTCCTAGGATCTATTAACCCGTTAGCTAGCAAGAGCTGGACAGGCTT CTCTGTGGAGCACTGGCTGCCCTGGGACTGGCTCTCCAGACCAGACTGGT AACAAACTCTAAGTATGTATCCTCGTCTCACGCTTCCCTCCTGTATATCA GGATACTATGCCGTCTTTCTCTTCCCCCTCTAACTCATACTGTCAGCGTT CTGTAAAGCTCTCTTTCCACCCCCTGTGCTAGACATTCCTTATCATGGTG ACCTTGGGGTAATGTTAAAAGGACGATAATGTATTGGCCTGTGCCTCTTT TTATTCTCTTTTACTCCCTTTCTTTACCTCATTTCCTTTCACATTATTCC CTATTTCATTTTCTTATTTCATTTTCTTTTTCTATTCTTTTCTTTTACTA AATAACCTATTTTTCATGGTCTTATCGAAATTCGTTTCTTTTTGTGTTTT ATTTCCCGTTCTCTTCCTTATATTTGCTTTTACCTCTCTCTTATTGTCCG CCCCCCCCTCTTCTATCTTCTTTTTATTACCTTACACCTACCCTCCTCCT CCCGTCCTTCTTTTTTATTTATG	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXTCCCGAAAAACAGGGCCCTGCACGCTAGGCATGTGTAG TACTATTGGGTAGTATCTCCACCCTTAAAAACCATAAAGAAGGAAATATA AGCAGGTGTACATATACACCTGTAATACACAAGTTCACAGCAAGGCTGGC TTACATAGCCAATGTCAATTCAGCTGGGACTTTATAGTGAGACCCCGTAA CAAACAAACAGCGCCATTGTGGAAGAGGGCAGATGAAAGGTAAAGATGCA GTCCTTGCCATTCAAAATATACTTTAATTCTCACAAGGAATCATACACAT ACCTGAAACCCTTTTTTTTTTGTCCCCCCCCCCCCCCATTTTAAGGTCAC CCTTGGCTATATATTGAGCTCCCCCCCAAACAGAAAAACAAAGAACCTGT GTTGTCTAATCCACTATAATCTGCATGTTTGTACGCCTGGCACGATTGAT CCCGGTCTTTTTTCTATGTCCTTTGGCCGCATATATCTTTTATTAGTGAC GTGTTTCTGAGGCTATTATGGTCCTATGGTGTGTACACTAGTATCTTAGT TCTTTTTGATAGCCTTTGATTTATAAGCTCGTAAACTCTCTGCTCCTTGT ATATACAATACACTGGAGATCATCAATGGCAGCGCCATTTACCTTCTGCC TCTATCTCTCCGTCTTTTCTCTGTTCTTCTCCTCCGATCCTTTT
quality values	Open. Hide. 8 10 8 8 8 15 19 22 28 39 29 28 24 22 22 32 27 21 10 10 10 17 17 39 28 28 26 26 26 22 29 13 13 9 10 9 9 9 9 9 9 10 14 15 25 28 34 23 17 17 24 19 23 13 11 11 12 19 21 19 14 9 10 8 8 8 10 10 14 16 16 24 28 28 32 37 43 46 37 39 36 39 39 47 41 41 23 23 23 23 32 37 43 48 48 43 43 40 34 25 30 28 25 31 22 20 20 23 19 19 16 17 20 28 31 37 43 39 44 40 32 23 15 15 14 15 34 34 48 48 48 48 48 57 57 48 48 48 57 46 44 48 44 57 44 47 57 57 57 44 42 35 35 35 44 40 32 16 14 14 24 19 22 32 32 35 44 47 57 48 48 37 37 37 32 31 32 39 39 39 41 41 41 41 41 42 31 32 23 23 23 28 37 43 43 37 32 28 28 33 33 29 18 14 14 14 23 32 33 33 33 33 29 33 24 28 22 19 13 11 13 13 26 24 31 37 32 35 32 32 28 23 28 28 28 35 39 32 39 28 25 19 17 17 17 18 24 28 37 42 43 48 59 47 39 37 21 19 13 12 12 29 32 21 17 14 24 23 39 37 47 37 37 30 28 28 24 26 19 19 13 13 18 28 25 26 19 13 13 21 15 13 8 8 8 8 8 10 12 23 11 11 11 12 12 18 21 28 31 26 18 14 10 8 8 8 8 8 10 10 12 12 11 10 10 15 15 13 11 8 8 8 13 19 30 21 19 12 12 12 18 24 28 15 17 12 12 8 9 11 12 12 15 15 19 15 18 15 19 15 10 8 8 8 10 10 12 18 29 29 24 11 11 11 14 10 10 13 15 11 12 12 12 13 12 13 12 25 19 19 11 11 11 12 15 8 8 8 8 8 8 8 11 11 11 12 11 16 16 12 9 9 9 9 9 19 10 11 10 11 15 12 16 10 10 9 12 11 11 11 8 6 6 6 8 7 10 18 16 10 8 8 8 8 8 10 12 9 9 11 8 8 8 8 8 8 6 8 6 6 8 8 7 8 12 10 9 10 10 13 21 12 10 10 8 8 8 8 8 6 6 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 10 8 8 8 8 8 8 8 8 11 12 9 8 8 8 8 8 8 8 8 8 8 6 6 8 13 12 10 10 10 8 10 8 8 8 8 10 10 10 10 10 10 8 8 8 8 8 8 10 8 8 8 10 13 11 10 8 8 8 8 8 8 8 9 8 13 13 12 12 13 21 16 9 9 10 15 13 9 9 8 8 8 10 10 10 11 12 12 11 9 10 12 10 10 9 9 8 8 8 8 6 6 8 10 8 10 8 8 8 8 12 13 11 11 11 11 8 8 6 6 8 8 11 12 8 8 6 6 8 8 10 8 9 6 12 6 6 6 6 9 9 6 6 6 6 8 10 10 10 6 6 6 8 10 10 10 10 8 10 8 8 6 6 6 6 6 13 8 12 11 10 10 8 7 6 8 8 8 8 8 8 8 8 8 8 8 10 10 11 11 11 10 9 11 11 11 11 11 11 11 11 13 10 10 9 9 9 9 9 9 9 9 10 11 16 12 13 8 6 8 6 6 8 8 8 9 9 9 9 8 8 7 7 8 10 10 10 10 10 11 10 10 10 8 10 7 9 10 8 10 10 11 15 10 9 9 9 8 8 8 8 8 8 10 9 9	Open. Hide. 6 6 6 11 8 8 8 8 15 16 10 10 10 21 17 39 43 39 43 34 34 25 25 25 37 36 37 37 34 23 10 9 9 7 7 7 7 7 9 10 10 11 11 18 21 22 25 32 30 33 33 44 33 33 33 33 19 23 12 9 9 11 12 10 10 10 10 14 14 17 15 11 11 11 16 16 21 21 37 41 53 53 53 39 39 39 39 39 36 28 22 22 29 29 28 35 42 42 40 43 36 36 43 43 59 43 39 32 28 37 29 22 16 16 9 9 10 16 21 10 10 10 12 10 12 12 20 21 32 35 37 39 39 31 28 25 25 28 28 35 35 30 33 24 24 28 28 33 31 30 30 33 39 39 33 35 35 35 39 39 36 36 37 44 36 36 25 25 25 44 44 44 32 20 20 20 29 20 25 25 36 36 43 43 43 47 48 48 48 48 43 43 37 37 35 42 42 57 48 48 48 57 57 57 42 42 35 32 22 18 32 18 32 32 50 43 43 43 32 32 32 43 42 43 43 43 35 35 32 43 32 43 43 50 44 38 33 33 42 43 52 52 52 43 44 43 31 31 31 29 27 27 28 20 20 21 27 24 24 20 27 31 42 44 43 43 43 42 32 24 12 11 11 11 24 15 18 14 14 27 32 18 13 13 13 26 21 23 28 20 20 20 36 31 39 39 39 37 25 23 20 20 28 34 39 46 43 46 48 48 47 43 33 27 19 19 21 21 12 11 11 11 11 11 11 11 11 13 28 25 37 39 39 35 35 24 25 12 12 12 25 19 16 12 12 19 21 12 16 16 15 15 20 20 32 22 24 24 11 10 10 10 13 13 13 17 15 13 13 9 7 7 7 8 8 8 9 10 16 16 14 18 17 16 9 9 10 9 9 10 17 18 28 15 13 13 13 13 12 15 16 16 22 12 11 9 12 10 23 17 18 13 10 10 12 12 10 8 8 8 8 8 8 13 15 19 12 11 11 11 10 10 9 9 14 12 10 9 9 8 8 10 15 10 8 10 8 8 6 6 8 8 8 6 7 8 8 10 12 10 9 9 9 9 9 8 8 8 6 6 8 8 9 10 10 10 10 10 12 15 16 16 13 11 12 10 10 10 13 10 10 10 10 10 8 8 10 10 9 8 11 8 10 10 10 10 10 10 12 10 15 12 12 12 12 14 14 10 8 9 8 12 10 10 10 10 10 10 10 8 8 8 9 9 10 10 11 8 12 9 9 10 11 8 8 8 8 11 6 6 8 8 8 10 12 16 15 16 13 10 10 9 9 9 9 10 10 13 13 8 8 10 10 8 8 8 8 8 8 8 10 10 8 8 8 9 8 8 8 6 6 8 8 13 14 10 11 11 10 8 10 8 8 8 8 12 13 10 8 8 8 8 8 8 9 9 10 18 19 11 11 10 8 8 8 10 8 8 8 8 8 8 8 15 13 13 11 13 11 10 11 11 11 11 12 12 22 19 19 12 10 6 6 8 8 8 8 8 12 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 8 8 8 6 8 6 6 8 6 6 6 6 6 8 8 9 10 10 15 12 14 14 10 10 12 12 10 8 8 8 10 11 13 13 13 11 11 9 14 10 10 9 9 8 8 7 6 8 8 10 10 10 10 8 8 8 8 8 8 8 8 9 9 10 10 11 14 14 14

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no321_h04.b1 MSMg01no321_h04.b1 CHROMAT_FILE:
MSMg01no321_h04.b1 PHD_FILE: MSMg01no321_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:11 2005
         (209 letters)



>mm_chr6_113537856_113538464
          Length = 609

 Score =  362 bits (187), Expect = e-104
 Identities = 206/217 (94%), Gaps = 8/217 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgttatttcaaatgcaagctgttcttgcaaccagggc--------gggcaaactctgc 52
           |||||||||||||||||||||||||||||||||||||||        |||||||||||||
Sbjct: 449 actgttatttcaaatgcaagctgttcttgcaaccagggctccagggagggcaaactctgc 390

                                                                       
Query: 53  acgttctagtctgcgttatactcatcctggccctcagataggagccctgagtcagctact 112
           | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aggttccagtctgcgttatactcatcctggccctcagataggagccctgagtcagctact 330

                                                                       
Query: 113 gatctgcagcttctcaacctggtcctaggatctattaacccgttagctagcaagagctgg 172
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 329 gatctgcagcttctcaacctggccctaggatctattaacccgttagctagcaagagctgg 270

                                                
Query: 173 acaggcttctctgtggagcactggctgccctgggact 209
           |||||||||||||||||||||||||||||||||||||
Sbjct: 269 acaggcttctctgtggagcactggctgccctgggact 233


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 609
Length adjustment: 9
Effective length of query: 200
Effective length of database: 600
Effective search space:   120000
Effective search space used:   120000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information