Query= MSMg01no321_h12.b1 MSMg01no321_h12.b1 CHROMAT_FILE:
MSMg01no321_h12.b1 PHD_FILE: MSMg01no321_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:13 2005
(351 letters)
>mm_chr6_80471255_80472005
Length = 751
Score = 609 bits (315), Expect = e-179
Identities = 327/331 (98%)
Strand = Plus / Minus
Query: 21 ccctagaattatcaggcagtggtgacacacacctttaatcccagcacttgggaggcagag 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ccctagaattatcaggcagtggtgacacacacctttaatcccagcacttgggaggcagag 692
Query: 81 gcaggcagatttctgagttcaagaccagcctggtctacaaagtgagttccaggacagcta 140
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 691 gcaggcagatttctgagttcaagaccagcctggtctacaaagtgagttccaggacagcca 632
Query: 141 gaactaaatagagaaaccctgtctcaaaaacaaaacaaaacaaagcaaaacaaaacaaaa 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gaactaaatagagaaaccctgtctcaaaaacaaaacaaaacaaagcaaaacaaaacaaaa 572
Query: 201 cataaaacaaacaaacaaaaaacactagaacttttcttcaaaaaaagaaaaaagaataaa 260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 571 cataaaacaaacaaacaaaaaacactagaacttttcttcaaaaaaagaaaaaagaaaaaa 512
Query: 261 atctcagaattaatatgaaaacacaaaagactaagggcagccaaagtccacctgaagaaa 320
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 511 atctcagaattaatatgaaaacacaaaagactaagggcagccaaagtcaacctgaagaaa 452
Query: 321 aaaaatactataagaggtattactgaaacta 351
||||||||||||||||||||||||||||||
Sbjct: 451 gaaaatactataagaggtattactgaaacta 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_h12.g1 MSMg01no321_h12.g1 CHROMAT_FILE:
MSMg01no321_h12.g1 PHD_FILE: MSMg01no321_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:13 2005
(288 letters)
>mm_chr6_80288618_80289300
Length = 683
Score = 464 bits (240), Expect = e-135
Identities = 271/284 (95%), Gaps = 5/284 (1%)
Strand = Plus / Plus
Query: 1 tgaacaataatagatgtaatattttgtattacatatttaaaatggtaccccaagaaatac 60
||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||
Sbjct: 201 tgaacaataatagatgtaaaattttgtattacatacttaaaatggtaccttaagaaatac 260
Query: 61 aaaaggactaaacatagaattccattggggtaggtctaaaatatttattggatttataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaggactaaacatagaattccattggggtaggtctaaaatatttattggatttataaa 320
Query: 121 atagtaaaggaggccaggctcaaacttcttccttctgcctgcttctgttgaagacagaag 180
||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 atactaaagaaggccaggctcaaacttctaccttctgcctgcttctgttgaagacaga-- 378
Query: 181 agacccgggatggtctcaactttggtcagatgcatatctttgtgcattgggcaacagaca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ---cccgggatggtctcaactttggtcagatgcatatctttgtgcattgggcaacagaca 435
Query: 241 atagatatatgcatatgtaaccagtaaaagtgtcaagaataaga 284
||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 436 atagatagatgcatatgtaaccagtaaaagtgtcaagaataaga 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 683
Length adjustment: 9
Effective length of query: 279
Effective length of database: 674
Effective search space: 188046
Effective search space used: 188046
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
