Query= MSMg01no323_a03.b1 MSMg01no323_a03.b1 CHROMAT_FILE:
MSMg01no323_a03.b1 PHD_FILE: MSMg01no323_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:05 2005
(650 letters)
>mm_chr6_91864429_91865478
Length = 1050
Score = 1073 bits (555), Expect = 0.0
Identities = 613/650 (94%), Gaps = 28/650 (4%)
Strand = Plus / Minus
Query: 1 agtggaatattccgttgtggtatcatatgggcactcaatagcctttagaccacagaatat 60
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 991 agtggaatattccgttttggtatcatatgggcactcaatagcctttagacgacagaatat 932
Query: 61 tttagattatgtatgctcaactcatacctgttggggtgcatgtggtatatacacgcacac 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 931 tttagattatgtatgctcaactcatacctgttggggtgcatgtggtatat--------ac 880
Query: 121 acgcacacacacacacacacacacacacacacacacacacacacacaccccctacctagt 180
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 879 acgcacacacacacacacacacacacaca--------------------ccctacctagt 840
Query: 181 catgtagaaacagaggagaatctgtgagcagccttaccagaggcagactccaccatggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 catgtagaaacagaggagaatctgtgagcagccttaccagaggcagactccaccatggcc 780
Query: 241 ttcatcttcagggaaagcagttctgtcaatttgtggatggattgccgctggaacttgtgc 300
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 779 ttcatcttcagggaaagcagttctgtcaacaggtggatggattgtcgctggaacttgtgc 720
Query: 301 agggtgttttggtcattgggcatcagcttagcagaggtggaggtgggggggacgtacttg 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 agggtgttttggccattgggcatcagcttagcagaggtggaggtgggggggacgtacttg 660
Query: 361 cccccactggtggctgcgggcattagtgtaggtggtggggcaggcgggggttgcttcttc 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 659 cccccactggtggctgcgggcattagtgtaggtggtggggcaggtgggggttgcttcttc 600
Query: 421 tgcatggggaggacctgtactgggatcacttctgcaagcaccactgtaggagttccaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgcatggggaggacctgtactgggatcacttctgcaagcaccactgtaggagttccaaaa 540
Query: 481 gtgaccaccagatcctgaatctcggaggcagtgggcactgcagggtcgttgatgagctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gtgaccaccagatcctgaatctcggaggcagtgggcactgcagggtcgttgatgagctcc 480
Query: 541 tcccaggtgaactcaaaaatattcctaatgccctttgggatggaaatgcccgagttgcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcccaggtgaactcaaaaatattcctaatgccctttgggatggaaatgcccgagttgcgg 420
Query: 601 caaanaatgaggagtttggagacgtgcgccagcagtttgggggctgaggc 650
|||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 caaaaaatgaggagtttggagacgtgcgccagcagtttgggggctgaggc 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_a03.g1 MSMg01no323_a03.g1 CHROMAT_FILE:
MSMg01no323_a03.g1 PHD_FILE: MSMg01no323_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:05 2005
(666 letters)
>mm_chr6_91695581_91696646
Length = 1066
Score = 1199 bits (620), Expect = 0.0
Identities = 646/658 (98%), Gaps = 6/658 (0%)
Strand = Plus / Plus
Query: 1 agtgtcttttggtgggagatttttgaaactccaggagggagactgtggtacgtgtgctgg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgtcttttggtgggatatttttgaaactccaggagggagactgtggtacgtgtgctgg 260
Query: 61 gcaggtggtcatgggctcaggccagctagagagactgggaaggcagagactcctgtgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaggtggtcatgggctcaggccagctagagagactgggaaggcagagactcctgtgtgg 320
Query: 121 tgtgggttttgagtccagctaccttgggaaaagttcatcaaattgaagtaggctgtgaga 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tgtgggttttgagtccagctaccttgggaaaagttcttcaaattgaagtaggctgtgaga 380
Query: 181 tcaggtctggagactgagactccaagactcctcatcgcccttcctaagggcatggcctac 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 tcaggtctggagactgagactccaagactcctcatcacccttcctaagggcatggcctac 440
Query: 241 ctccagtggccctgacaggatgggtccctgttgacttagaaccaatggaggtgaatgagt 300
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 ctccagtggccctgacaggatgggtccctggggacttagaaccaatggaggtgaatgagt 500
Query: 301 ccagagaggggcggcagctagcaaggtcaggagcacagtgtaaatcttggcagccaaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagagaggggcggcagctagcaaggtcaggagcacagtgtaaatcttggcagccaaggg 560
Query: 361 ggtcagataaacagcgaagacagtgaaaacctctccaaaccagaaaaacagatccttgtg 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtcagataaacagagaagacagtgaaaacctctccaaaccagaaaaacagatccttgtg 620
Query: 421 gcgttggtgatgggcagacgctgttgtaaacaagcaagggttctgttaatgattcttgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcgttggtgatgggcagacgctgttgtaaacaagcaagggttctgttaatgattcttgct 680
Query: 481 tggccctgggagcagaccccatgcagggccttttagtggcttttagaacatcttccaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggccctgggagcagaccccatgcagggccttttagtggcttttagaacatcttccaggc 740
Query: 541 tcagaggggaagaagaaaacaaaaacacaagttaataagtggctaagcgtgaaacatcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcagaggggaagaagaaaacaaaaacacaagttaataagtggctaagcgtgaaacatcct 800
Query: 601 ccagcgctccaaacagggcttacaggctcacaagtggctgggagtgggggggtggggg 658
|||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 801 ccagcgctccaaacagggcttacaggctcacaagtggctggg------ggggtggggg 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
