Query= MSMg01no323_a18.b1 MSMg01no323_a18.b1 CHROMAT_FILE:
MSMg01no323_a18.b1 PHD_FILE: MSMg01no323_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:10 2005
(683 letters)
>mm_chr6_105131752_105132834
Length = 1083
Score = 1228 bits (635), Expect = 0.0
Identities = 671/683 (98%)
Strand = Plus / Plus
Query: 1 ctaattagagagctgttggtcaccacaaaggtatgggaagccacaacttcatccataggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaattagagagctgttggtcaccacaaaggtatgggaagccacaacttcatccataggg 260
Query: 61 tggctgttgaaatcattcaaaaaagctatagctgaatggcacttttgactactcctttcc 120
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 tggctgttgaagtcattcataaaagctatagctgaatggcacttttgactactcctctcc 320
Query: 121 tttgagagctgccaaggcatattttggtaccacaaatgttaatcctcaggaatgaagttg 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tttgagagctgccaaggcatattttggtatcacaaatgttaatcctcaggaatgaagttg 380
Query: 181 ttttgttgtagttgttgttgtttcaaattcattgttattgattaattgatatcaatgttg 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttattgtagttgttgttgtttcaaattcattgttattgattaattgatatcaatgttg 440
Query: 241 aagttcattttgtctcattacaaccctgtttttctagaatcatttgttaaaatgactgtt 300
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 441 aagttcattttgtctcattacaaccctgtagtcctagaatcatttgttaaaatgactgtt 500
Query: 301 ctaatccacactaaattatttatgtataacttagtttgcaaaattttgttctgttcctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaatccacactaaattatttatgtataacttagtttgcaaaattttgttctgttcctca 560
Query: 361 agtcttctcttatatctttattgctaaagcataatagatggcttgaaatcgagtagaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtcttctcttatatctttattgctaaagcataatagatggcttgaaatcgagtagaagt 620
Query: 421 ctttcaactttgttctaaaaacaatcagataacaggcgaatatggttacatcatatgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctttcaactttgttctaaaaacaatcagataacaggcgaatatggttacatcatatgctt 680
Query: 481 catcaacattttcaattagcttctcatgcatttctctcactgaaacagggttttttataa 540
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 681 catcaacattttcaattagcttctcatgtatttctctcactgaaacagggttttctataa 740
Query: 541 ttctgatgtgagatgaccttttaaaaccatttgagaataatggataacagtgtaaactta 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 ttctgatgtgagatgaccttttaaaaccatttgagaataatggatagcagtgtaaactta 800
Query: 601 tgatctgcgatcatggtttattgcttcatttattttcagatttttatttctccagtttgc 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgatctgtgatcatggtttattgcttcatttattttcagatttttatttctccagtttgc 860
Query: 661 aatccacagtgtctaggttgttt 683
|||||||||||||||||||||||
Sbjct: 861 aatccacagtgtctaggttgttt 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_a18.g1 MSMg01no323_a18.g1 CHROMAT_FILE:
MSMg01no323_a18.g1 PHD_FILE: MSMg01no323_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:10 2005
(657 letters)
>mm_chr6_105257573_105258629
Length = 1057
Score = 520 bits (269), Expect = e-151
Identities = 295/309 (95%), Gaps = 10/309 (3%)
Strand = Plus / Minus
Query: 1 aatcaggacttggaggaatgtagatggtaccgactgggacatcttttccatgggtactag 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 304 aatcaggacttggaggaatgtagatggtaccgactgggacatctcttccatgggtactag 245
Query: 61 cttttggtaatcacaggaactttgtgacgtatacaattgttagaaaccgcatgatgatca 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 244 cttttggtaatcacaggaactttgtgacatatacaattgttagaaaccgcatgatgatca 185
Query: 121 ggatggggttgctgtcaggatataagtgaacactgttggcatttatatcctgacactaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggatggggttgctgtcaggatataagtgaacactgttggcatttatatcctgacactaac 125
Query: 181 caacagtagcctaaacagaataaggcccattctacatgggggaatttatgtttggtacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 caacagtagcctaaacagaataaggcccattctacatgggggaatttatgtttggtacta 65
Query: 241 aaaacccagtcaaccacatgtggattgggcatcctt-----tttttttagaagacaacct 295
|||||||||||||||||||||||| ||||||||| | || ||||||||||||
Sbjct: 64 aaaacccagtcaaccacatgtggactgggcatccatggaactt-----agaagacaacct 10
Query: 296 tttttgagc 304
|||||||||
Sbjct: 9 tttttgagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
