CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGGATCCGCGG
AATTCTATAAACTTACCTGTGTTTGTAAGGAGAAACTTAAATTTTAAGGA
AAAATGAAACTCATGTTACTCGTATTAACATGACCAGAAAATGGATGGAT
GTAGTATGGCTATAAAGTCTTTTCTTCCTTTAGGATTAGGTTGCAAAAAG
GGTTCATGTAAAACATTTCTCTCCTACAGGAAAATGTCTTTGTATATATA
CCCCTGTTCTCTATATACATCTTGGGTTTTGAAGACTCCAGGACATAATG
AAGGACCCTGTCAGAACGTCTGTAGATGAGAATTTGTAAGAATGTTGACC
CAAGAACTTCCTCAATCTGGGGACTACGATGACAGGATTTTCTCAGTAGT
TGATTGAGTCCTTTGAAAACCAGTGGTCAAGTAATGCCATCAGCATCCAA
CAGATACCCAAATTGTAGTTTTCATAAGTCTAGAGTCTCCAAATCTTCCA
CTAGGCAGAGTCTTGACAGCTTGCCTAAAATAAGTTTATTATGGTTAAAC
TATGCTGAGCACTCCAGATTTAATGTAACAACAGATATCTCAATATTATA
TTCAGAAATTATCTATAAGCTCTGAATTAAATAAAAGGTACATTATCAAT
ATTGTTAGCTAAGAATTGTTAATTTGTTAATCTTTTCCGTGGTATCTGTA
TTGCAATATTTTGCTATGTAAAGACTGGGACTCCATCTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAAAGAGAATGAAGGGTTATGAGA
TGATTTGAGGAGAGGAAAAGTAAAGAAGAAATGATATAACTATATTGAAA
TCTCAAAAAAAATAAATAATAAAACAAAAATGTTCCTAGAAACAAATGAA
AATGAAAACACATCTACCAGAACTCCTGAGATATAGCCAAGTCAGGTGAA
AGAAGAAACTTTATAGCGATGAATGCTGGTATTAGAAAATCTGAGATATG
GGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAG
ACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATCCATCCCAT
AATCAGCTCCCAAACACTGACACCATTGTGGTACACTAACAAGATTTTGC
TGAAAGAACCCAGATGTAGCTGTCTCTTGTGAGACTAAGCCAGGGCATAG
CAAACACAGAAGTGGGTGCTCACAGTCAGCTATTGGATGGATCACAGGGC
TCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCA
ACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAACTCTT
GACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCA
AAGAGAGGCCCATTGGACACACAAACTTTATATGCCCCAGTACAGGG

Query= MSMg01no324_a22.b1 MSMg01no324_a22.b1 CHROMAT_FILE:
MSMg01no324_a22.b1 PHD_FILE: MSMg01no324_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:16 2005
         (695 letters)



>mm_chr6_4572724_4573818
          Length = 1095

 Score = 1282 bits (663), Expect = 0.0
 Identities = 684/691 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattctataaacttacctgtgtttgtaaggagaaacttaaattttaaggaaaaatgaa 64
           |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 ggaattctataaacttaaatgtgtttgtaaggaggaacttaaattttaaggaaaaatgaa 264

                                                                       
Query: 65  actcatgttactcgtattaacatgaccagaaaatggatggatgtagtatggctataaagt 124
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 actcatgttactcgtattaacataaccagaaaatggatggatgtagtatggctataaagt 324

                                                                       
Query: 125 cttttcttcctttaggattaggttgcaaaaagggttcatgtaaaacatttctctcctaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttttcttcctttaggattaggttgcaaaaagggttcatgtaaaacatttctctcctaca 384

                                                                       
Query: 185 ggaaaatgtctttgtatatatacccctgttctctatatacatcttgggttttgaagactc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggaaaatgtctttgtatatatacccctgttctctatatacatcttgggttttgaagactc 444

                                                                       
Query: 245 caggacataatgaaggaccctgtcagaacgtctgtagatgagaatttgtaagaatgttga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 445 caggacataatgaaggaccctgtcagaacgtctgtagatgagaatttgtaagaatgttgg 504

                                                                       
Query: 305 cccaagaacttcctcaatctggggactacgatgacaggattttctcagtagttgattgag 364
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 505 cccaagaacttcctcaatctggggactacgatgacagaattttctcagtagttgattgag 564

                                                                       
Query: 365 tcctttgaaaaccagtggtcaagtaatgccatcagcatccaacagatacccaaattgtag 424
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 565 tcctttgaaaaccagtggtcaagtaatgccaccagcatccaacagatacccaaattgtag 624

                                                                       
Query: 425 ttttcataagtctagagtctccaaatcttccactaggcagagtcttgacagcttgcctaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttttcataagtctagagtctccaaatcttccactaggcagagtcttgacagcttgcctaa 684

                                                                       
Query: 485 aataagtttattatggttaaactatgctgagcactccagatttaatgtaacaacagatat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aataagtttattatggttaaactatgctgagcactccagatttaatgtaacaacagatat 744

                                                                       
Query: 545 ctcaatattatattcagaaattatctataagctctgaattaaataaaaggtacattatca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcaatattatattcagaaattatctataagctctgaattaaataaaaggtacattatca 804

                                                                       
Query: 605 atattgttagctaagaattgttaatttgttaatcttttccgtggtatctgtattgcaata 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atattgttagctaagaattgttaatttgttaatcttttccgtggtatctgtattgcaata 864

                                          
Query: 665 ttttgctatgtaaagactgggactccatctt 695
           |||||||||||||||||||||||||||||||
Sbjct: 865 ttttgctatgtaaagactgggactccatctt 895


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space:   743225
Effective search space used:   743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)