TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGATACCAACACAAAACAATTCCTGGGTATAACCAATATCTTTA
TTGATATGTAAAAATAATTTTTACACAAAACATTGATAAAGAGGGTTTTT
CTCCTGGTAGGTGGTGGCGCATAATCACAACTTTTAGAAGATGGGGGAAG
GGAGGATAATGAGGTAGCGGGCAACCTGAGCCACACAGTGAGTCTGCGAC
CAGCCTGGGCTACAAACCAAGATCCAGTCTCAACAACAAACAAACAAGCA
AACAAACAGCACTTCAAACAGTTCGAACTGCGTCAGCAGTGTAGACCAGG
AAGAGACACTTGGCACTTAAAGGTTTAATATTGACTAGACCCTTTAAAAA
TAATTGCTTAGCTAAATATCTATGTTCTTGTGTCTACCTGCCTTCAGCTA
GCATTGATTTATCTGTCTGTTTGCTTTTCACCAGGCTCCACTGTGTAGCA
AAGCTCTTGTATTTTAAGTGTATAACCATGGTCTAAAAATGCCTCAGCCT
TCAAGCCAACAGACTCATCCTGAATAATACAATGATGGAAATTCAAAAGA
CTCAAGGCTGTGGTCCTGGGAAATGGTAGAAGGTGGCTAAATGACACATT
CTCCCTTCCATGTTTTCCTTATTATGCTTTCTTTGCTTATACACATGCAC
TTCTCATATGAAGCACGAGAAAGTCTCATGTTAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATGCCTGTTCTCTGCTTTTTCTTT
TTTTTTTCCTATCAGGTTCATTATATCTAGTTGTGTGTTGAAATTTTTGA
TGCATTTGCCATTGACATTTGTGCAAGGTGATCAGTATGTGTGTATTTGC
CTTCTATTACATACAGAAATCCAGATTGACCAGTACCATTTGTTAAAAGG
TGTGTATTTTATTAAAAAAATGTATGTGCATCTTTATAAAAGAAATTAAA
AGGCATGTGGATTTATGCCTGTATCATCAATTCATTCCCATTGTTCATGT
CTGTCTTGCTCCAACACTAGTTTTTTATTACTAATAGCTCTGTGGTACAA
CTTGAAATTGGGGATGGTGATAGCTTCGAAAGTTCTTTTATTAAGGATTG
TTTTAGCTATCCTGATTATTGGTTTGCTTGCTTTGTTGTTTTTGCTGTGG
TATGTGTGTTTGTCTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGCCCCCCCCCCCCCCTCCTTTTTCCCCTTTTTTTCCTCCTTCCTTTT
TTTTCTCCCTTCTTTTGTCTCCTTTCCGTTTCCTTCTCCTTTTCCCCTCG
CTCTCCCTTTCTCTTTTCCCTCTTTTTTCTCCCTTCCTCCCTCCTTTCCT
CCTTTTTTTTTNCTTCTTCTCTCTCTTTTTCTCCCTCCCCCT

Query= MSMg01no324_e02.b1 MSMg01no324_e02.b1 CHROMAT_FILE:
MSMg01no324_e02.b1 PHD_FILE: MSMg01no324_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:31 2005
         (690 letters)



>mm_chr6_23413413_23414502
          Length = 1090

 Score = 1265 bits (654), Expect = 0.0
 Identities = 666/670 (99%)
 Strand = Plus / Plus

                                                                       
Query: 20  aacacaaaacaattcctgggtataaccaatatctttattgatatgtaaaaataattttta 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aacacaaaacaattcctgggtataaccaatatctttattgatatgtaaaaataattttta 279

                                                                       
Query: 80  cacaaaacattgataaagagggtttttctcctggtaggtggtggcgcataatcacaactt 139
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 280 cacaaaacattgataaagagggtttttctcctggtaggtggtggcgtataatcacaactt 339

                                                                       
Query: 140 ttagaagatgggggaagggaggataatgaggtagcgggcaacctgagccacacagtgagt 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttagaagatgggggaagggaggataatgaggtagcgggcaacctgagccacacagtgagt 399

                                                                       
Query: 200 ctgcgaccagcctgggctacaaaccaagatccagtctcaacaacaaacaaacaagcaaac 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctgcgaccagcctgggctacaaaccaagatccagtctcaacaacaaacaaacaagcaaac 459

                                                                       
Query: 260 aaacagcacttcaaacagttcgaactgcgtcagcagtgtagaccaggaagagacacttgg 319
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaacagcacttcaaacagtccgaactgcgtcagcagtgtagaccaggaagagacacttgg 519

                                                                       
Query: 320 cacttaaaggtttaatattgactagaccctttaaaaataattgcttagctaaatatctat 379
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 520 cacttaaaggtttaatattgactagaccctttaaaaataattgcttagctaaatatttat 579

                                                                       
Query: 380 gttcttgtgtctacctgccttcagctagcattgatttatctgtctgtttgcttttcacca 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gttcttgtgtctacctgccttcagctagcattgatttatctgtctgtttgcttttcacca 639

                                                                       
Query: 440 ggctccactgtgtagcaaagctcttgtattttaagtgtataaccatggtctaaaaatgcc 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ggctccactgtgtagcaaagctcttgtattttaagtgtataaccatggtctaaaaatgcc 699

                                                                       
Query: 500 tcagccttcaagccaacagactcatcctgaataatacaatgatggaaattcaaaagactc 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tcagccttcaagccaacagactcatcctgaataatacaatgatggaaattcaaaagactc 759

                                                                       
Query: 560 aaggctgtggtcctgggaaatggtagaaggtggctaaatgacacattctcccttccatgt 619
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aaggctgtggtcctgggaaatggtagaaggtggctaaatgacacattctcccttccatgt 819

                                                                       
Query: 620 tttccttattatgctttctttgcttatacacatgcacttctcatatgaagcacgagaaag 679
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 820 tttccttattatgctttctttgcttatacacatgcatttctcatatgaagcacgagaaag 879

                     
Query: 680 tctcatgtta 689
           ||||||||||
Sbjct: 880 tctcatgtta 889


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)