Query= MSMg01no324_i19.b1 MSMg01no324_i19.b1 CHROMAT_FILE:
MSMg01no324_i19.b1 PHD_FILE: MSMg01no324_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:53 2005
(671 letters)
>mm_chr6_119684336_119685406
Length = 1071
Score = 665 bits (344), Expect = 0.0
Identities = 350/352 (99%)
Strand = Plus / Minus
Query: 320 gccttggtagcaatttactgtatcagttacttagctgtggtaaccagatttcttacaaga 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 gccttggtagcaatttactgtatcagttacttagctgtggtaaccagatttcttacaaga 1012
Query: 380 agcaatttaaaggaagaaggatttattttggctcctggtttgagagtgtagttcatcatg 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 agcaatttaaaggaagaaggatttattttggctcctggtttgagagtgtagttcatcatg 952
Query: 440 gtgggaaggcattgtggtggaaatgagaggcagttggttccaatgtgtctgcctttagga 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 gtgggaaggcattgtggtggaaatgagaggcagttggttccaatgtgtctgcctttagga 892
Query: 500 ggcagagagagatgaatgctctgcttttgattcttaaagtaaaaattaggtcatgaaaac 559
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 ggaagagagagatgaatgctctgcttttgattcttaaagtaaaaattaggtcatgaaaac 832
Query: 560 aatcatggtgacattgggcactataaatcttaactgcggaggaagtagtactgacttccc 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aatcatggtgacattgggcactataaatcttaactgcggaggaagtagtactgacttccc 772
Query: 620 tcacactgactacttttcagaaaaagaaacctgcctattatgaaaggcagtg 671
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 771 tcacactgactacttttcagaaaaagaaacctgcctattatcaaaggcagtg 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_i19.g1 MSMg01no324_i19.g1 CHROMAT_FILE:
MSMg01no324_i19.g1 PHD_FILE: MSMg01no324_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:53 2005
(610 letters)
>mm_chr6_119515883_119516890
Length = 1008
Score = 1145 bits (592), Expect = 0.0
Identities = 605/610 (99%), Gaps = 2/610 (0%)
Strand = Plus / Plus
Query: 1 ctgggggctggctgggaggctcagggaattggaacaggggaggagaagaggccccagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggggctggctgggaggctcagggaattggaacaggggaggagaagaggccccagatg 260
Query: 61 gtgagagcctcacccaggaccatgagcaccagggtcagagcccagctgtctccctcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgagagcctcacccaggaccatgagcaccagggtcagagcccagctgtctccctcccag 320
Query: 121 ctgcttatcaggacagacaggctccacctgtggctcaccaccacagcagcattactagga 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ctgcttatcaggacagacaggctccacctgtggctcaccaccacagtagcattactagga 380
Query: 181 gctccatgggctggggatggggatggggggcggacaacatctcccacctgacgtcaggaa 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctccatgggctggggctggggatggggggcggacaacatctcccacctgacgtcaggaa 440
Query: 241 gccggagtgaaagctgagccaactgcggggaatgaacacgttgggataagaaactactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccggagtgaaagctgagccaactgcggggaatgaacacgttgggataagaaactactgg 500
Query: 301 gaagtttccaggtaagcaagtccttttatttgcttggtaagctcagatctgtgcataggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagtttccaggtaagcaagtccttttatttgcttggtaagctcagatctgtgcataggc 560
Query: 361 ctgtggaggacccaggagaaagaacagtccttgtttacaagggtgtgtggtcaacgagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtggaggacccaggagaaagaacagtccttgtttacaagggtgtgtggtcaacgagga 620
Query: 421 gatgggagaaggaaagcaggctacttgtcttggaaggagagaggcggagatcaaggcacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 gatgggagaaggaaagcaggctacttgtcttggaaggagagaggcggagatcaaggcgcc 680
Query: 481 tcttactctgtggctgaagggtgaacagctatgtttgcctaagggtgaatactcttaagc 540
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 t--tactctgtggctgaagggtgaacagctatgtttgcctaagggtgaatactcttaagc 738
Query: 541 atccttgcacattggagtctgcacagggagcttggaaacgttgcaatgggctgtcagcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atccttgcacattggagtctgcacagggagcttggaaacgttgcaatgggctgtcagcat 798
Query: 601 tgctgtggct 610
||||||||||
Sbjct: 799 tgctgtggct 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1008
Length adjustment: 10
Effective length of query: 600
Effective length of database: 998
Effective search space: 598800
Effective search space used: 598800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
